Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00974 ATGTTAGGCTTAATTAGTCTGCTGGATAACCTGATGGGTCTGGTAAGGATGGGAACATTACCTGTTACATGTGAAATAGTGGAAGGAAAAGAAGGAACGGAGTCCAGGAGATTGGATAATTATGCTGGAGAAAATTGTATGCCAAATTCTGGAAACAAGTATTGTATAGAGGATGATATAAATCGTCTTTTTGAGGCTATCGATTTAAGAAATTATGTCAGAAGTCTTAAAATGAAATGTGACAACGGTAAGAGGCCGATGAGCGTCAGTTCTACAAAGCTATCTGGGATTGGGATTTCTGATCATGTAAACTTGAAACAAGCACTGAGAGGGTTGTGTATATCTCATGCATCAGAGACAGCTGCTATGAAGAGATTCTCAAAACCATCTACTTCAAAGGTATCAGAAGCTGGGACCATCAAAAGGTTGTACTCAACTGTGGTAGTTGAGGCAAATGCATCAAGTTCTCAGATAAATGATTGCACAGGATTCGAAATCTCTCTGGTTCCAGAAACGGCAATGCCATCTGAGGCAATGCCAGAGAATCTGCAGCAGAAGGCTGATGCATGTAGCTCAAGTGTTTTAGATTCAAATCTTTTGGCCGATGGAGCAAAGGCAAAGTTGACAAGCTTCAGATTAGCATCTAGTGATCAGATTGTTCCTTTTTCCTGGGAGATAGATGACATGAAGCTAGTTTCAGGAGTTGAAATGTGTGCCTCATCAATTGGCGATTCTAGTGAGAATGTGGCAGACCTTCACGAGACTCCTCCTGACTCTAGTGAAGCTTCTGTCAACTCCCCGGGGACAAAGAAGGTTCCTAATAGAAAGTTACACTTACTGCATTTGAACTCAATTTCTGGGGGTAGGGTGGATAAACTTGCAAGCAATGAACAATGTTTGATAGAGCCTGCATTGAAGAATAAAAGTTTGCACAAGAAGAATTCCACGTTGAAGGGTTCTACTCCATGTAACAGAGGATGCCATAATGACTTGGATCCTTGTATAAGCAATAGGGAGACGAACAATGGTTTCTTATATCACAACAGGAAAGGAGCTGAGAATCCTTTTCCATCATTCTTCAACTCAAATGGCAATGACTTTCACGCGAGTACCTTGTGTAAAGATTCAAGAAAACTTGGTTTTGGTTTTAAATGCAGTAAAAGAACTAGAAATCTGATTACAAAAAATGACAAGACATCCAGATTAAAGGAAAAAAGTTCTTTTTCTCAAAGCTCAAAAAGTAGCATAGGCGAATGTAGTAGTAGCACAAGCTTTACTGATGAGAGTAGTTTAAGTGGATCCTATCGCAGTGACCATAGGCCTCAAATGTCAAAAGACTTGAGATGGAAAGCTGTTCGTCTTGTTCAGCACAAGCATGGAAAGTTAAATTTGAGCAAATTCAAGTTCTTAAGAAGGATTGGTTGTGGGGATATAGGAACTGTTTATCTTGCAGAGTTGATGGGTACAAACTGCTCTTTTGCCATCAAGGTAATGGACAACGAATTTTTGGCTAGTAGAAAGAAAATGTTCCGAGCTCAAACAGAAAAAGAGATACTACAAATGCTTGATCATCCTTTTCTCCCCACGCTCTATGCTCATTTTGTGACGGAGAGCCTGTCATGTTTGGTTATGGAGTATTGCCCTGGTGGTGATTTGCATGTGCTGCGCCAAAGGCAACCTTGTAGGAACTTTTCTGAACCGGCAGCAAGGTGGCTTTTACTCTTGTTAGGGATGGAGAAGTTACTGAGGAGGAGATCAACCAACAGGTTTTATGCTGCTGAAGTTCTTCTTGCCTTGGAGTATTTGCACATGTTAGGAATTATCTATCGAGATCTAAAGCCCGAAAATATCCTGGTACGAGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCACTCAGATGTGCTGCGAACCCAATTCTTCTCATATCATCTTCTTCCACAGTGGGAACCACAAAGAAAATTTCAAGTCCATGTTCTGCTGCAAGCTGCATGCACCCTTTCTGTCTCCAACCAAGTTGGCAAGTCCCCTGTTTTAGTCCTTTAATAATTTCTTCAGGAGCCAAATCTCGAAAGATGAAGTCTGATCCAAGTGCTCAGATAAATTCTCGGCCACAAGTTGTAGTAGAACCAACTGATGCTCGTTCCAACTCCTTCGTTGGCACACATGAATACCTTGCTCCTGAGATTGTTAAAGGTGAGAGTCATGGAAATGCTGTCGATTGGTGGACGTTTGGAATATTCTTGTTTGAACTTTTATATGGTAAGACGCCCTTCAAGGGCTCAAGTGATGAGGATACGCTAAACAATATTGCGTCTCAAAGCTTGAAGTTCCCAACTTCTCCCATGGTCAGTTTCCATGCAAGAGATTTGATTAGGAGGTTGTTAGTAAAGGACCCTGAAAACCGATTTGGTTCTGTAAAAGGTGCCGCAGAGATAAAGCATCACCCTTTCTTTGAAGGCCTTAATTGGGCGCTTATACGATGCGCAGTACCACCTGAGATGCCGAAATCCTTTGATTTCGGTAGCCATCAACTTTCTATGCCTTCCAAAAGAGACGGCACAAACTATCTTGGAAACACAGAATATTGCACGGTTTTTGACTTGTTTTAG 2616 0.4136 MLGLISLLDNLMGLVRMGTLPVTCEIVEGKEGTESRRLDNYAGENCMPNSGNKYCIEDDINRLFEAIDLRNYVRSLKMKCDNGKRPMSVSSTKLSGIGISDHVNLKQALRGLCISHASETAAMKRFSKPSTSKVSEAGTIKRLYSTVVVEANASSSQINDCTGFEISLVPETAMPSEAMPENLQQKADACSSSVLDSNLLADGAKAKLTSFRLASSDQIVPFSWEIDDMKLVSGVEMCASSIGDSSENVADLHETPPDSSEASVNSPGTKKVPNRKLHLLHLNSISGGRVDKLASNEQCLIEPALKNKSLHKKNSTLKGSTPCNRGCHNDLDPCISNRETNNGFLYHNRKGAENPFPSFFNSNGNDFHASTLCKDSRKLGFGFKCSKRTRNLITKNDKTSRLKEKSSFSQSSKSSIGECSSSTSFTDESSLSGSYRSDHRPQMSKDLRWKAVRLVQHKHGKLNLSKFKFLRRIGCGDIGTVYLAELMGTNCSFAIKVMDNEFLASRKKMFRAQTEKEILQMLDHPFLPTLYAHFVTESLSCLVMEYCPGGDLHVLRQRQPCRNFSEPAARWLLLLLGMEKLLRRRSTNRFYAAEVLLALEYLHMLGIIYRDLKPENILVREDGHIMLTDFDLSLRCAANPILLISSSSTVGTTKKISSPCSAASCMHPFCLQPSWQVPCFSPLIISSGAKSRKMKSDPSAQINSRPQVVVEPTDARSNSFVGTHEYLAPEIVKGESHGNAVDWWTFGIFLFELLYGKTPFKGSSDEDTLNNIASQSLKFPTSPMVSFHARDLIRRLLVKDPENRFGSVKGAAEIKHHPFFEGLNWALIRCAVPPEMPKSFDFGSHQLSMPSKRDGTNYLGNTEYCTVFDLF* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00974 871 FunFam Serine/threonine-protein kinase OXI1 578 638 - -
Pte17g00974 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Pte17g00974 871 SMART serkin_6 467 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00974 871 MobiDBLite consensus disorder prediction 246 272 - -
Pte17g00974 871 MobiDBLite consensus disorder prediction 396 440 - -
Pte17g00974 871 CDD STKc_phototropin_like 467 838 - -
Pte17g00974 871 Gene3D Transferase(Phosphotransferase) domain 1 714 834 - -
Pte17g00974 871 SUPERFAMILY Protein kinase-like (PK-like) 445 842 IPR011009 -
Pte17g00974 871 Pfam Protein kinase domain 717 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00974 871 Pfam Protein kinase domain 468 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00974 871 Gene3D Transferase(Phosphotransferase) domain 1 586 653 - -
Pte17g00974 871 FunFam serine/threonine-protein kinase D6PK-like 715 838 - -
Pte17g00974 871 PANTHER FLIPPASE KINASE 1-RELATED 332 842 - -
Pte17g00974 871 FunFam Serine/threonine-protein kinase D6PK-like 465 550 - -
Pte17g00974 871 Gene3D Phosphorylase Kinase; domain 1 459 571 - -
Pte17g00974 871 ProSiteProfiles Protein kinase domain profile. 467 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00974 871 MobiDBLite consensus disorder prediction 405 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00974 Pte-Chr17 24897364 24902281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00974 404 850 AGC Kinase Gene Family AT2G36350 63.274 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte17g00974 Pkinase 5.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00974 - - qsa:O6P43_000442 905.59