Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00964 ATGTCTGCAGTGGTGGCAAAACTGCTAGAGCCTGTGAGCTACTGCACCGCTGATGATGCTTTTCTTTGTCAGGCTTGTGATTCTTCAATCCACTCAGCTAATCCGTCAGCTCGCAGACATGAAATGGTATGCTTGACGACAGGTTCCTTTAAGCCTTTTGATCATGGAGGTCGCCATGCGGGACAGCTTAAAAATTCAGCACCATCTTGGCATCGAGATTTTACAAAAAAAAAAACTCGAACTACAAGACATGGGAGGTACCCAACAAACCATCAAACATCAAAAAGTTTCAAGAAGATGAGGAAGAACTAG 312 0.4391 MSAVVAKLLEPVSYCTADDAFLCQACDSSIHSANPSARRHEMVCLTTGSFKPFDHGGRHAGQLKNSAPSWHRDFTKKKTRTTRHGRYPTNHQTSKSFKKMRKN* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00964 103 CDD Bbox1_BBX-like 12 41 - -
Pte17g00964 103 MobiDBLite consensus disorder prediction 55 103 - -
Pte17g00964 103 Pfam B-box zinc finger 13 43 IPR000315 GO:0008270
Pte17g00964 103 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 11 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00964 Pte-Chr17 24817287 24817598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00964 14 86 C2C2-CO-like Transcription Factor Family AT1G68520 49.351 3.03e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte17g00964 zf-B_box 2.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00964 - - qsu:112018537 90.1225