Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00950 ATGGCTTTTACTCGAACTCATCTCCTTCAACTTTCACCTCATTCTTCTTCATTCGCAGCGTTTAACTTTAACTACATCGTCTTCTCCGATCTCACCAGCAGCTCTCGCTGCCCGCAACAGACGCCATGCTTACCTTCTTTGACTTCCGTGCACAAGGCTTCTCTGGTTTATCCGACTACTAAGCATTCGGTCAAATGCTTCACGAAATCAACGGAGGAGGACCGTTTGAATGAATCGGAGACTGTTGTTTCTGATGTCAACGAATTCAGTGACTACCCTCAGCCTTCCGTGGCCACAAATGGCTCAATTCCTACGCAGCGGGTTGCGACGCCGTCTTCTGGAGATTCTCTCTTGATCGGGATCCGTGAGCCGGTTTATGAGGTTTTGGAAGTGAAGCCCAATGGAAGTGTAGCAACTGAAAAAATTAACAGGCGTCAGCTCTTGAAATCAAGTGGTCTTCGTCCAAGAGATATTCGAAGTGTAGATCCATCACTATTCTTGACGAATTCGATGCCCTCTTTACTGGTCCGGGAAAATGCTATACTCCTTAATTTGGGTTCATTGAGAGCAATAGCAATGCCAGAACGTGTACTTATATTTGATCACCATCGGAGAGGAGGGCAAGCATTCCTAGATGCATTATTGTCTCGATTAAACCCCAAGAGCAATAATGGAGGGCCATCCATGCCTTTTGAGCTTGAGGCTGTTGAAGCAGCTTTGCTTTCAAGAATACAACGCTTGGAGCAGAGACTGATGGCTCTAGAACCTCGTGTTGAATCTTTGTTAGAGGTTTTGCCAAACCGGTTGACTGGTGATGTATTGGAGCAACTCCGTATTAGCAAACAACATTTAGTCGAACTAGGTTCCAGGGCTGGTGCTCTAAGACAAATGCTGCTTGATCTTCTGGAGGATCCTCATGAAATACGAAGAATTTGTATAATGGGGAGAAATTGCATACTTAAGAAAGGAAATGACGCTGTTGAATGTTCCATTCCCTCAGATAAACAGATCGCTGAGGAAGAAGAGGAAGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGGCAAGCTGAAAGGTTGCTTGATTCTGCTAAAGAAATGGAGGATTCCATTGCCGTCAATTTGAGCTCTCGAAGGCTTGAGGTTAGCAGAGTGGAACTGCTTCTCCAGGTTGGGACATTTTGTGTGGCAGTCGGTGCCCTTGTGGCAGGTATCTTCGGCATGAACTTGAGGTCCTATCTTGAAGAACATATGTTTGCCTTTTGGCTAACTACAGCAGGAATAGTAGTCGGTGCAATGATTTCGTTTTTTCTTATGTTTTCATATCTCAAGAGAAGGAAAATACTATAA 1368 0.4437 MAFTRTHLLQLSPHSSSFAAFNFNYIVFSDLTSSSRCPQQTPCLPSLTSVHKASLVYPTTKHSVKCFTKSTEEDRLNESETVVSDVNEFSDYPQPSVATNGSIPTQRVATPSSGDSLLIGIREPVYEVLEVKPNGSVATEKINRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVRENAILLNLGSLRAIAMPERVLIFDHHRRGGQAFLDALLSRLNPKSNNGGPSMPFELEAVEAALLSRIQRLEQRLMALEPRVESLLEVLPNRLTGDVLEQLRISKQHLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCILKKGNDAVECSIPSDKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHMFAFWLTTAGIVVGAMISFFLMFSYLKRRKIL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00950 455 Pfam CorA-like Mg2+ transporter protein 339 446 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pte17g00950 455 CDD Mrs2_Mfm1p-like 128 454 IPR039204 -
Pte17g00950 455 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 120 455 IPR039204 -
Pte17g00950 455 FunFam Magnesium transporter MRS2-11, chloroplastic 204 386 - -
Pte17g00950 455 FunFam Magnesium transporter MRS2-11, chloroplastic 121 202 - -
Pte17g00950 455 Coils Coil 335 355 - -
Pte17g00950 455 Gene3D - 122 202 - -
Pte17g00950 455 Gene3D Magnesium transport protein CorA, transmembrane region 203 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00950 Pte-Chr17 24674281 24680275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00950 119 456 MRS2 Gene Family AT5G22830 83.728 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00950 K16075 - qsa:O6P43_000409 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00950 17 24674281 24680275 Pte17g00950 17 24674281 24680275 RCT