Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00945 ATGGATGACACAGAGATTCTGGGAGCTCCTGGAAGCTCCATGCATGGTGTGACCGGCAGAGAGCAGACCTTCATGTCTTCAGTTGCTTCCCCCGTGGTTCCAACTGATACAACAGCAAAGTTTGATTTGCCAGTTGACTCTGAGCACAAAGCCAAAGTATTCAAACTCTTTTCCTTTGCCAACCCTCACATGAGAACCTTCCACCTATCCTGGATTTCCTTCTTCACTTGCTTCGTCTCTACCTTTGCTGCTGCACCACTTGTTCCCATCATTCGGGACAACCTCGACCTCGACAAAAAAGACGTCGGGAATGCAGGAGTTGCTTCAGTTTCCGGCAGCATATTCTCTAGGCTCGTGATGGGAGCAGTCTGCGACTTACTAGGTCCACGCTATGGCTGCGCTTTCCTCATCATGCTTTCAGCTCCAACCGTGTTCTGCATGTCCTTCGTGTCTGACGCTTCTGGATACATAGCTGTGCGTTTCATGATTGGATTCTCCCTCGCAACTTTCGTTTCCTGCCAGTACTGGATGAGCACCATGTTCAATGGCAAGATCATAGGGCTTGTCAATGGCACTGCAGCTGGGTGGGGCAACATGGGTGGAGGAGCGACCCAACTCATCATGCCCTTGGTGTATGAACTCATCAAAAGAGCTGGTTCGACTCCTTTCACTGCCTGGAGGATCGCCTTCTTCCTTCCAGGTTGGATGCACGTGATCATGGGCATCTTGGTCTTGACCCTTGGCCAAGACTTGCCCGATGGCAATCTTAGTACACTGCAGAAGACGGGTAATATGTCAAAGGATAAGTTCTCCAAGGTGCTGTGGTACGCTGTGACAAATTACAGAACATGGATATTTGCCCTTCTCTACGGTTACTCTATGGGGGTTGAACTGACCACTGATAATGTCATTGCTGAGTATTTCTACGACAGGTTTAATCTGAAGCTACACACTGCTGGTATAATTGCTGCAACATTTGGTATGGCCAACCTCGTTGCTAGGCCATTTGGGGGATATGCATCCGATGTTTCGGCCAGATTGTTCGGAATGAGAGGGAGGCTATGGACACTGTGGATTCTCCAAACCTTTGGAGGACTTTTCTGCATATGGCTCGGACGTGCCAATTCACTTCCACTTGCAATTCTGTCCATGATTCTATTCTCTTTGGGAGCACAGGCTGCATGTGGAGCCACTTTTGGCATCATCCCATTCATTTCCAGAAGGTCTTTGGGGATCATATCTGGCCTGACGGGTGCTGGTGGGAACTTCGGTTCAGGACTAACCCAATTGGTGTTCTTCTCAACCACAACGTTCTCCACAGCCTCTGGTCTGTCTTGGATGGGAGTCATGATTGTAGGTTGTACTCTACCTGTTGCACTGGTCCACTTCCCACAATGGGGTGGTATGTTCACTTCTCCCTCAAATGACGTCAACAAATCAACTGAAGAGCACTACTATGCTTCTGAATGGAACGAGGAAGAGAAGCAGAAAGGCCTTCACGTCGGGAGTCTCAAGTTTGCAGAGAATAGCAAGTCTGAACGTGGCAAACGGGTTGCCTCCGCACCAACACCACCAAATTCGACACCCAATCATGTATAA 1599 0.4909 MDDTEILGAPGSSMHGVTGREQTFMSSVASPVVPTDTTAKFDLPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLDLDKKDVGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSDASGYIAVRFMIGFSLATFVSCQYWMSTMFNGKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIKRAGSTPFTAWRIAFFLPGWMHVIMGILVLTLGQDLPDGNLSTLQKTGNMSKDKFSKVLWYAVTNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAATFGMANLVARPFGGYASDVSARLFGMRGRLWTLWILQTFGGLFCIWLGRANSLPLAILSMILFSLGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTTFSTASGLSWMGVMIVGCTLPVALVHFPQWGGMFTSPSNDVNKSTEEHYYASEWNEEEKQKGLHVGSLKFAENSKSERGKRVASAPTPPNSTPNHV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00945 532 SUPERFAMILY MFS general substrate transporter 60 461 IPR036259 -
Pte17g00945 532 MobiDBLite consensus disorder prediction 506 532 - -
Pte17g00945 532 Pfam Major Facilitator Superfamily 71 427 IPR011701 GO:0022857|GO:0055085
Pte17g00945 532 Gene3D MFS general substrate transporter like domains 266 466 IPR036259 -
Pte17g00945 532 FunFam High affinity nitrate transporter 59 256 - -
Pte17g00945 532 Gene3D MFS general substrate transporter like domains 59 256 IPR036259 -
Pte17g00945 532 FunFam Nitrate transporter 2.1 267 468 - -
Pte17g00945 532 CDD MFS_NRT2_like 67 460 IPR044772 GO:0015112
Pte17g00945 532 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 518 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00945 Pte-Chr17 24604709 24607003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00945 7 533 Inorganic Solute Cotransporters AT5G60770 80.835 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00945 K02575 - gmx:100782969 967.992