Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00925 ATGAGTCAGACAAACTTCTCAGCTGACCAACACAAAATGACGATGATGTTTCAAACAACTGTCAAGTCCTCAAAGAGAACTAAGTTGCTTCCTAGTAAAGCCAGCAAAGATCGTCATACCAAGGTGAATGGTCGAGACCGCCGTGTCCGATTACCTCCTTTATGCGCAGCACGGATCTTTCAACTCACCCGTGAGCTCGGCTACAAAACTGTTGGTGAGACCATTGAGTGGTTGCTACGAATGGCAGAGCCGGCCATTATCGCAGCCACTGGCACAGGCATATCTGTTTCTGGCAGCACCAGCAGCACCCCTGGTTCCTCGAATACATCACATGGTCCTGGCGAGCTTCACGAGGCCACAAGTATAGTTCATGGAGACATAGATTTAGTCAACGAGTACTGGGGCGGTACAGGGACCGACCTTCAGCCATTGCCAGCAGCGCCACCACCTTTTGAGTTTGATCTGACTTCAGCCTCGGAAATGGAGTTTTATGCTAATGACTTTGAGATACTGCAGTCTTTGGAGTAA 528 0.4924 MSQTNFSADQHKMTMMFQTTVKSSKRTKLLPSKASKDRHTKVNGRDRRVRLPPLCAARIFQLTRELGYKTVGETIEWLLRMAEPAIIAATGTGISVSGSTSSTPGSSNTSHGPGELHEATSIVHGDIDLVNEYWGGTGTDLQPLPAAPPPFEFDLTSASEMEFYANDFEILQSLE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00925 175 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
Pte17g00925 175 MobiDBLite consensus disorder prediction 20 42 - -
Pte17g00925 175 MobiDBLite consensus disorder prediction 95 115 - -
Pte17g00925 175 MobiDBLite consensus disorder prediction 95 117 - -
Pte17g00925 175 Pfam TCP family transcription factor 34 110 IPR017887 -
Pte17g00925 175 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 109 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00925 Pte-Chr17 24433746 24434273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00925 22 93 TCP Transcription Factor Family AT3G27010 68.493 1.46e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte17g00925 TCP 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00925 - K16221 jre:108987029 127.487