Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00911 ATGATTTGCTTTTGGTTTCTCGCCTTGATGTGTTTAAGTTCGAGCTCAGCTCAGCAGTACTATGATCCACAAAATTGTTCTGTGGATGACAATAGCGTAGGCTCAAGATACACTTGTAATTTATTTGAAACCAAAGCATGCAGTACATTTTTAGTGTATAGAAGTAACCAACATTTCAACACTGTCTCTGATGTAGCAAACCTATTCCATAGAAACCTTGATGACTTGCTTACCTTCAACAACGTGAACTCTTCGTCTGAGATACTGGTACCAGGTAGAGAAGTCATTGTTCCAATTGACTGTTCTTGTTCAGGTCAGTATTTTGAGGCTATTTTGAATTACACAGTTTCTGTAAGTACAACAGTCTTGGAGGTTGCTTGTGAAATTTTTGAAGGGCTACTGAAATCTCTTACCTTGAAACAAGAAAACCCTCTTCAAGAAAATAAGCTCCAAGTTGGTTCAGTGCTTCGTGTGGCTTTGAGATGTGCATGCCCTGACAATAATTTGGCTAACAGTAAAGGGGTGAGGCTTCTTGTCACGTATCCTCTCGTAGAAGGAGATATGCCTGACATACTGTGTGAAAAGTTTGACATTTCAGTTCAAGATTTGTGGTCAGTGAATCATATTGATTCTTGGACAACAGTTTTTCCAGGTACAACTCTTTTAGTTCCTTTGCAACAGGACCCAGTCATAGTTCCTATTAGCTCGAACTCTCCTCCACCAGCTCCTGGTTTCCTTTCTACAGCTCCCGTGACAAAATCGACAGTGAAAAGCTCAACAATCAGAAACTTGTACATTGCAGGAGTTCCTTTGATGGTTTTTGCATTGTTTGCATGTTTGTTGTCCATACAGGCATTTAGAAAAAAGAAGACAGAAAATTTCGTGCCACTGACAATTAGAAGTTCCCCAATTTCACTTTCACCATTGAGAGGCTCTCCTAGATCTGTCCAAACTGGAAGAAGCTCACCAGTTTCCTGTTTATCTCCTGATCTTTTGGTTGGAATAAAATACTCACTGTCAAATTACAGCATCGAAGAGCTGAAGAATGCCACAGGGAATTTCAATGATGACAACAAAATGAGTGATTCTGTATACAAGGGTCTAATTGACAACGTTGAGGTCATGATTAAGCATGAAAGGTTCGAAGACACTCGCCGAGCTATCGATGTGCATTCGAAAATCAATCATGTGAATATTTTGAATTTTCACGGGGTTTGCTATGGAGAGGACGAGTGTTCAAGGTCTTACATAGTTTGCGAGTTACCTAAGAATGGTTGCCTGAAAGATTGTTTATCTAATCCAGCTAGTTCCCTCAAATGGGAGCAACGGACACAAATAGCTTTTGACATTGCAACAGGCCTTCACTACTTGCATCGGTACACTTCCCCTTCATATGCTCACATGAATGTTACCAGCAGAAACATATTTCTCACAGAAAATTGGAGGGCTAAGCTAGGAAACATTGGTACTGGCACTTCTGATACCATCTCTTCCAATGGAAACAATAACACGCAGTCCCTCAGAGAAAGGATTGCACAAGAGTACGTCCTAAATGGCTCAGCTTCTGAAAAAGTTGATATTTTTGCATTTGGGGTTGTCTTGCTTGAGCTTATCACTGGCAGAGAGGATACAGCTGAGACACCATTAAAAAACTGTATTGGTTTTTTAGGAGGGGGAGCCAGTGAAAGTGGTTGTTTTGAACAACTGAGGGGTCTAATGGATCCTAGCCTCAAGGATTATCCTCTTGCAGAGGCTCTATGCTTAGCAGTTTTAGCAAAAGCTTGTGTGGAAGATGATCCTCTTCATAGGCCTAGCATGGATGACATTACCAAAGTTCTTGCAAAAATGATTAGCTAA 1857 0.4066 MICFWFLALMCLSSSSAQQYYDPQNCSVDDNSVGSRYTCNLFETKACSTFLVYRSNQHFNTVSDVANLFHRNLDDLLTFNNVNSSSEILVPGREVIVPIDCSCSGQYFEAILNYTVSVSTTVLEVACEIFEGLLKSLTLKQENPLQENKLQVGSVLRVALRCACPDNNLANSKGVRLLVTYPLVEGDMPDILCEKFDISVQDLWSVNHIDSWTTVFPGTTLLVPLQQDPVIVPISSNSPPPAPGFLSTAPVTKSTVKSSTIRNLYIAGVPLMVFALFACLLSIQAFRKKKTENFVPLTIRSSPISLSPLRGSPRSVQTGRSSPVSCLSPDLLVGIKYSLSNYSIEELKNATGNFNDDNKMSDSVYKGLIDNVEVMIKHERFEDTRRAIDVHSKINHVNILNFHGVCYGEDECSRSYIVCELPKNGCLKDCLSNPASSLKWEQRTQIAFDIATGLHYLHRYTSPSYAHMNVTSRNIFLTENWRAKLGNIGTGTSDTISSNGNNNTQSLRERIAQEYVLNGSASEKVDIFAFGVVLLELITGREDTAETPLKNCIGFLGGGASESGCFEQLRGLMDPSLKDYPLAEALCLAVLAKACVEDDPLHRPSMDDITKVLAKMIS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00911 618 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00911 618 Gene3D Phosphorylase Kinase; domain 1 333 420 - -
Pte17g00911 618 Gene3D LysM domain 179 230 IPR036779 -
Pte17g00911 618 Gene3D Transferase(Phosphotransferase) domain 1 423 618 - -
Pte17g00911 618 SUPERFAMILY Protein kinase-like (PK-like) 336 614 IPR011009 -
Pte17g00911 618 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
Pte17g00911 618 Pfam Protein tyrosine and serine/threonine kinase 377 611 IPR001245 GO:0004672|GO:0006468
Pte17g00911 618 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 617 - -
Pte17g00911 618 Pfam LysM domain 185 224 IPR018392 -
Pte17g00911 618 Pfam LysM domain 61 98 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00911 Pte-Chr17 24250640 24252648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00911 1 618 Receptor kinase-like Gene Family AT2G23770 29.764 1.87e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte17g00911 PK_Tyr_Ser-Thr 3.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00911 - - twl:120001848 699.508