Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00865 ATGAATGATGATGTCACTGTATGGAGGGCATCTGTGGATCAAAATCACATTTCTGTGAAAAATGAGTTCGACAATGAAATGCTTGGTGGTAAGCAAGGTTCGACGTCATTTGTGGGTGATGTTTCAAAATGCAAAGAAGTGACTGTAGAAGGAGGCAGCAGGACCCCTAATGGGAGTGAGGTCAAAAAGTTGATTAATATACCACAACAGCAGCCCCAAGGGCCACATATACACTGGGAGAGATTTCTTCCCTTAAGATCATTAAAAGTTCTTCTTGTGGAAGATGATGATTCAACTCGCCACATCGTTAGTGCTCTATTGCGAAACTGCAGTTATGAAGTCGTTGATGTTTCTAATGGTCTCCGAGCATGGAAATACTTAGAGGATCCAGCCAATCACATTGATCTCATTCTAACAGAAGTGGCCATGCCATTTTTATCTGGAATCAATCTTTTAAGCAAGATCGTGAACCATAAAGCTCTCAAGAATATCCCTGTGATCATGACGTCATCTCAGGATTCCATGGGTATAGTCTTTAATTGTTTATCAAAGGGTGCAGTTGATTTTTTAGTGAAACCTATTCGGAAGAATGAACTTAAGAACCTCTGGCAGCATGTCTGGAGAAGATGCCACAGTTCTAGTGGCAGTGGCAGTGGCTGCGAAAGTGGGACACAATATAGAAAATTTGCTAAATCGAGAAGTAATGAAGCATCTGAAAACAATACTGGTAGCAGTGATGAGTTTGACTATGGGAGTGATGACATTAGCATTCGAGATGGAACTGATGATGGGAGTGGCACTCAGAGCTCTTGGACAAAGCTTGCAGCTGAAGTGGACAGTCCCCATCGAATATCACTAGCTGACGCACCTGATAGTATATGTGCACAGGTGATCTATACAAAGCCTGAAATGATTAGTAATAGATGGGTGCATACAACAGAAGAACAGGAAGGGGAACATGGGTTTAAGGACTTGGATTTGCAATTGGAACACCAATCAGATAAGGTACCTATCCATCCATCCATTGATAGGATAAAGAAGCTGTCAGATGTGGAACTGGATAATGGACACAGTAATGAAGGTGAAAAGGGAAAGCCTGGATGTGAAATTAGTGGGACATATAGGAATCTGGTTCTAGATGTAAGCCCAGCGGTGCATTGTAGAAACCAAGGACCCAGACAAAGGGAAGTTGACACATCCAGTGGCCTTGGTTGTATGTCACAGACCAAAATAAGTCTTTATTCAGAAGAACATCCATCACTTGAACTGTCATTAAAGAGAATGGAAGGAGCTGCTGATGTTCAAAAGGTTACAAGTGATGACCACAAAGTCTTGAGACATTCAAATCTGTCAGCATTCACGAAATACAATAATGCTTCTAGTCTCCAGCAGGCACAAATGGGGAATGTTGGAAGCTGTTCGTCATCCAAAGAGACAATACGGGACTTCCCATCTCTTTCAAATGGCATTTCCCCTTATAAACAGTCTAATGGGAGTGAGGACAACAAAGATATGGCCTCCACCAACAGATATAATAACTCTAAACTGGAAGCTTTTGATAAGAATCGCGAGTCTGTGACAGGAATTGGATCTTTCTATTCTTCTTGCTCTGACCCTGCTAAGGATGGTTCCTCACTTACGCAGCAAATGATAACCGTGAAGTCTGAAGGTACAGAACTAGCTAAATCACAACTGAGAAGCTTAGACTTCCAAATTGAACAGCAACGTCAACATCACAACTACCATCAACTCCTTCAGAGGGGTACACTAGATTTACAATCAGACAATGATGATTTGTCTCTGAAAGCCATGACAAGAGCTGCTGAGCAATGTGCTTCAAGTGTTTTTGGAGGAACTGCTGACAGTAATACTGGAAACTACAGTGTTAATGGTAGCGCATCAGGGAGTTACCATGGTAGCAATGGACAGAAAGGAAGCTGCACATTGACAACTGAAATGGCTAATGTGGAAAGGGACAATGGAGGAAACAATGCTGTTGGTTCCGCCAATGAAGGACGTGTTGCACTGAGAGAAGCCGCCTTAACCAAATTCCGCCAGAAAAGAAAAGAAAGATGCTTTGAGAAGGTTCGATACCATAGCAGGAAAAAGCTGGCTGAGCAACGGCCTCGCATTCGGGGACAATTTGTTAGGAAGATAGTATCTGAAGACAAAGAAGAAAATTCTGTGAGCAATGGCCAGATGTCGACTGATAATTCTCAAGATGATATGAGATAA 2235 0.4224 MNDDVTVWRASVDQNHISVKNEFDNEMLGGKQGSTSFVGDVSKCKEVTVEGGSRTPNGSEVKKLINIPQQQPQGPHIHWERFLPLRSLKVLLVEDDDSTRHIVSALLRNCSYEVVDVSNGLRAWKYLEDPANHIDLILTEVAMPFLSGINLLSKIVNHKALKNIPVIMTSSQDSMGIVFNCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSGCESGTQYRKFAKSRSNEASENNTGSSDEFDYGSDDISIRDGTDDGSGTQSSWTKLAAEVDSPHRISLADAPDSICAQVIYTKPEMISNRWVHTTEEQEGEHGFKDLDLQLEHQSDKVPIHPSIDRIKKLSDVELDNGHSNEGEKGKPGCEISGTYRNLVLDVSPAVHCRNQGPRQREVDTSSGLGCMSQTKISLYSEEHPSLELSLKRMEGAADVQKVTSDDHKVLRHSNLSAFTKYNNASSLQQAQMGNVGSCSSSKETIRDFPSLSNGISPYKQSNGSEDNKDMASTNRYNNSKLEAFDKNRESVTGIGSFYSSCSDPAKDGSSLTQQMITVKSEGTELAKSQLRSLDFQIEQQRQHHNYHQLLQRGTLDLQSDNDDLSLKAMTRAAEQCASSVFGGTADSNTGNYSVNGSASGSYHGSNGQKGSCTLTTEMANVERDNGGNNAVGSANEGRVALREAALTKFRQKRKERCFEKVRYHSRKKLAEQRPRIRGQFVRKIVSEDKEENSVSNGQMSTDNSQDDMR* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00865 744 MobiDBLite consensus disorder prediction 719 744 - -
Pte17g00865 744 FunFam Two-component response regulator-like PRR37 88 248 - -
Pte17g00865 744 ProSiteProfiles Response regulatory domain profile. 89 207 IPR001789 GO:0000160
Pte17g00865 744 MobiDBLite consensus disorder prediction 231 270 - -
Pte17g00865 744 SUPERFAMILY CheY-like 79 212 IPR011006 -
Pte17g00865 744 PANTHER TWO-COMPONENT RESPONSE REGULATOR 88 269 IPR045279 GO:0009736
Pte17g00865 744 Gene3D - 87 255 - -
Pte17g00865 744 Pfam Response regulator receiver domain 90 201 IPR001789 GO:0000160
Pte17g00865 744 SMART REC_2 88 203 IPR001789 GO:0000160
Pte17g00865 744 ProSiteProfiles CCT domain profile. 677 718 IPR010402 GO:0005515
Pte17g00865 744 MobiDBLite consensus disorder prediction 484 508 - -
Pte17g00865 744 MobiDBLite consensus disorder prediction 231 249 - -
Pte17g00865 744 Pfam CCT motif 677 718 IPR010402 GO:0005515
Pte17g00865 744 MobiDBLite consensus disorder prediction 726 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00865 Pte-Chr17 23746560 23753403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00865 46 291 Response Regulator Gene Family AT5G60100 59.761 4.14e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pte17g00865 Response_reg 3.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00865 K12129 - qsu:111988659 678.322