Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00859 ATGCACACTCCAATCCCACCGGAAATGTTTGGAAACATGAACACTGTTTTCTCAGGCTTCTCTGTAGGTCAAACGCCTCCAGCTCCACAAATGCAACAGCTATTTTCTTCAGGTAATTGTAATTCCTATCATAACATCGTCATTCCTGTACCTGAGCAACTGGAGTTGGACTCGCTGAGTGAGACTCTGAGGCTGCTCAACTCAGAGGTCAGCAATGACAGTTGCAGTGGTAGTAGCTGCTATGGTTCACCAACCTCACTTGCAAGCTATGGAAGCACAACTACTCTACCTCCAGCAACGCCGACCGTTCACACTCGACCAAGTTGTCTGATGCAAAGGAGTATCAGCAGCCATTCGCTGCAGAAAAACGGTGTCAGTGGGGTCCACGACCCCTTCTCTAAGTTTTTCTCCGAGCTTATTGACTCTGAAACTGGCCCCGTCCGCAGAGTTTACAGTACCGGAGATTTACATCGAATGAAGATGATGCAACGTAGCCATCGATCAGAGAGTCCTCTATCGAGTGAAAGTAATATGATCATTGAGGGCATGAGCAGAGTCTTTCCTTATAGTCCTGAGGAAAAGAAAGAGCGGATTGAAAAGTACAGAAGCAAGAGAAGCCAGAGGAATTTCAACAAGAAAATCAAGTATGCTTGCAGGAAGACATTAGCGGACAGCAGGCCACGAATTAAAGGACGGTTTGCCAAGAACGATGAACTTGAACAGAAGAACCCTGTCGCTGAATGGAAACATGTAGGTGGGGAACACGAAGAAGAAGATGAAGATGATTGGATCAATCTTCTTGATACGTTCTCTGCAAATATAGTTCAGTGA 831 0.4585 MHTPIPPEMFGNMNTVFSGFSVGQTPPAPQMQQLFSSGNCNSYHNIVIPVPEQLELDSLSETLRLLNSEVSNDSCSGSSCYGSPTSLASYGSTTTLPPATPTVHTRPSCLMQRSISSHSLQKNGVSGVHDPFSKFFSELIDSETGPVRRVYSTGDLHRMKMMQRSHRSESPLSSESNMIIEGMSRVFPYSPEEKKERIEKYRSKRSQRNFNKKIKYACRKTLADSRPRIKGRFAKNDELEQKNPVAEWKHVGGEHEEEDEDDWINLLDTFSANIVQ* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00859 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 67 248 IPR045281 GO:0009909
Pte17g00859 276 ProSiteProfiles CCT domain profile. 194 236 IPR010402 GO:0005515
Pte17g00859 276 Pfam CCT motif 195 236 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00859 Pte-Chr17 23670432 23672410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00859 182 245 C2C2-CO-like Transcription Factor Family AT5G24930 46.875 4.61e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte17g00859 CCT 6.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00859 - - qsa:O6P43_028305 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00859 17 23670432 23672410 Pte17g00859 17 23670432 23672410 RCT