Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00852 ATGTATTGTATATATGTAGTATGCATGTCTCAGTTAATAACTAGCTTGGTTATGCTTTGTTCTAGATGGTCGAGAATCGCTAGAAAATTACCAGGGCGTACCGATAACGAGATCAAGAATTATTGGAGAACTCACTTGAGGAAAATGGCTCAGGATCAGAAGAAACATGCTTCATCTCTCAAATCAGAATCTTCTAATTGTTTGTCATCGTCATCAATTAGTAACCAGATGGTGGAGTATTTTCCTTCCTCAGAAGCTGGAGCAGAGAGTTATTTTGACACAGGTGGAGTACTGACTGTGAAAGCTACAGCTGATAAGAAAAAAGACAAAGCCAAAGAACTAGAAGGTGAAGATCAGCTGGAGTACTCCTTGGATGATATATGGAAAGATATAGCTCTTCCAGATAATGATTTTCTGCCAACTGTTTTTGAGGGGCACAGTGAAGAAGGCTGCAATTTCTCCTGCCCACCAATGGCGTCCCCATCTTGGGAGTACGAGTATTCTTCAGAACCACTGTGGATGATGGACGAAGAGGAAATTGTTCCATTCTTTGGAGGACGCGATGATCGTGAAGCCATTTCTTATGGTCTGAGGATTGCTGAACATCCAGGGATCAAAGTCACTATGGTGAGATTTGTAGCCCCAAGTGGGAAGACACTCAGCTTTGGTGCAACACTGATCGGTATAGATGCAAACTAA 699 0.4206 MYCIYVVCMSQLITSLVMLCSRWSRIARKLPGRTDNEIKNYWRTHLRKMAQDQKKHASSLKSESSNCLSSSSISNQMVEYFPSSEAGAESYFDTGGVLTVKATADKKKDKAKELEGEDQLEYSLDDIWKDIALPDNDFLPTVFEGHSEEGCNFSCPPMASPSWEYEYSSEPLWMMDEEEIVPFFGGRDDREAISYGLRIAEHPGIKVTMVRFVAPSGKTLSFGATLIGIDAN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00852 232 Gene3D - 10 72 - -
Pte17g00852 232 CDD SANT 22 46 IPR001005 -
Pte17g00852 232 Pfam Myb-like DNA-binding domain 21 46 IPR001005 -
Pte17g00852 232 ProSiteProfiles Myb-like domain profile. 22 46 IPR001005 -
Pte17g00852 232 SUPERFAMILY Homeodomain-like 12 50 IPR009057 -
Pte17g00852 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 50 IPR017930 -
Pte17g00852 232 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 83 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00852 Pte-Chr17 23590755 23620544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00852 21 179 MYB Transcription Factor Family AT3G46130 39.506 2.80e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte17g00852 Myb_DNA-binding 3.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00852 K09422 - qsa:O6P43_000247 170.629