Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00842 ATGGCGAAGATTTTTATTTCATCTCCACCATTCATTGGCACCGCATTTCCTTCTATCTATCGCCGTGGCGGTGGTGTGGGTCTACTACAAAACTTGCCTCACCGTAGTAATACTCATAGACTTGTCAGCACTAGAGTTAGGTTCAGCTTTCATGAAATTCCTTCGATCTCTTCCTTTGACTTCAATGGAATTGTTACTAGAGCTGAAGCTCTTCTCCTTACCATAGCTGATACTACTGTTGCTACTGATTCGGCCACTGCTGGCGCGACAGCTTCCACCTCTACCGATGTTGCTGCGCAGAAGGGTGGAGGGTGGTTTAGCTTTATTTCCGATGCCATGGAAGTCGTTCTCAAGGTATTGAAAGATGGCCTTTCTGCCGTGCATGTACCCTATGCGTATGGATTTGCCATTATACTCCTCACTGTTGTTGTTAAGTTAGCAACTCTTCCATTGACAAAGCAACAGGTGGAGTCAGCGATGGCTATGCAAAATCTTCAACCAAAACTTAAAGCCATTCAAGAAAGATATGCTGGAAATCAGGAAAGAATACAGCTCGAGACAGCAAGGTTATATAGGCAGGCAGGGGTTAACCCGTTAGCAGGATGTTTGCCAACACTTGCTACGATTCCTGTTTGGATAGGACTGTACCAAGCGCTCTCGAATGTGGCAAATGAGGGATTACTGACTGAAGGATTCTTTTGGATCCCTTCGCTGGGTGGTCCAACTACAATAGCTGCTCGACAAAGTGGATCTGGAATTTCTTGGTTGTTGCCATTTGTGGATGGTCATCCACCACTGGGCTGGCAAGAAACAGCTGCATACCTTGTTTTACCAGTTCTTCTTGTCATTTCTCAGTATGTCTCAATGGAAATTATGCAACCCCCTCAGACTAATGATCCGAATCAAAAGAACACACTTCTGGTTTTCAAGTTTCTACCACTCATGATTGGATACTTCTCCTTATCTGTCCCATCAGGGTTGACGATATACTGGTTTACGAATAATGTCCTTAGCACAGCACAACAAGTATGGTTACGTAAGTTAGGAGGTGCAAAGCTCGTTGTAAATGAGAACACAAGTGACATCATTACAGCAGGACGTGCAAAACGATCAACTTCTCAGCCTGCAAGAGGGGGTGACAGGTTTAGGGAGTTGAAAGAAGAGAAGAAAAAGTTTAGCAAGGCATTACCATCGGAAGGTATTCAAAACTTTGCTTCCCCATCCGATTCTGATGATGATTCAGATGAAGAGACACCAGATAAGGCAAGGGAAGCTTCAGAACAAGCATACGCTTCATCTGGCGCCAAAGATATTCCTGATTTTTCTCCACAAAGAAGAAGCAAAAGATCAAAGCGTAAACGAACAGCTTGA 1371 0.442 MAKIFISSPPFIGTAFPSIYRRGGGVGLLQNLPHRSNTHRLVSTRVRFSFHEIPSISSFDFNGIVTRAEALLLTIADTTVATDSATAGATASTSTDVAAQKGGGWFSFISDAMEVVLKVLKDGLSAVHVPYAYGFAIILLTVVVKLATLPLTKQQVESAMAMQNLQPKLKAIQERYAGNQERIQLETARLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLLPFVDGHPPLGWQETAAYLVLPVLLVISQYVSMEIMQPPQTNDPNQKNTLLVFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKLVVNENTSDIITAGRAKRSTSQPARGGDRFRELKEEKKKFSKALPSEGIQNFASPSDSDDDSDEETPDKAREASEQAYASSGAKDIPDFSPQRRSKRSKRKRTA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00842 456 NCBIfam membrane protein insertase YidC 133 346 IPR028055 -
Pte17g00842 456 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Pte17g00842 456 MobiDBLite consensus disorder prediction 365 384 - -
Pte17g00842 456 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Pte17g00842 456 MobiDBLite consensus disorder prediction 392 456 - -
Pte17g00842 456 PANTHER OXA1 79 389 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00842 Pte-Chr17 23468623 23473406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00842 24 394 Chloroplast and Mitochondria Gene Families AT2G28800 67.989 3.11e-177 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00842 K03217 - vvi:100260431 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00842 17 23468623 23473406 Pte17g00842 17 23468623 23473406 RCT