Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00834 ATGGGTGCATGCTTGAGCGCGCGAATCAAAGCCGAGAGCCCATGGAACACAGGGGTAAGTTCAAGATATGTGAGCAGAGATGGCAATGATCTCAGCAGCAGCATTAGATCATCTACGTCAGTACCACAGACACCTAGGAGTGAGGGTGAGATCCTGCAATCACCCAATTTGAGGAGGTTTAGTTTAGCAGAACTTAAAATGGCCACTAGAAATTTCCGTCCAGATTGTGTTTTGGGAGAAGGTGGTTTTGGTTCAGTATTTAAGGGCTGGATGGATGAGAATTCGTTCGCTGCGACCACCCCTGGGACTGGAATGATCATTGCCGTGAAAAGGCTCAAGCAAGATGGTCATCAGGGTCACAAGGAGTGGTTGGCGGAAGTGAACTATCTGGGGCAGCTTACCCATCCTAATCTAGTGAAACTTATTGGATACTGCCTCGAGGAAGAGCATCGGTTACTGGTTTATGAATTTATGCCTCGAGGCAGTTTGGAGAGTCATTTATTTAGGAGAGGTTCTTATTTTCAACCCCTTTCTTGGAGCCTCCGCTTGAGAGTAGCTCTTGGTGCTGCCAAAGGGCTGGCATTTCTTCACAGTGCTGAAACAAAAGTCATATACAGAGATTTCAAGACTTCAAATATCTTGCTGGATTCTAACTACACTGCAAAGCTTTCTGATTTTGGGCTGGCCAAGGATGGACCAACAGGTGATAAAAGCCACGTTTCAACCAGGGTCATGGGAACTTACGGATATGCAGCCCCAGAATATCTAGCAACTGGTCATCTAACTATCAGAAGTGATGTTTATAGTTTCGGAGTTGTTCTTCTGGAAATGTTGTCTGGCAGAAGGGCAATTGACAAGAATCGACCATATGGGGAACAAAATCTGATGGCATGGGCTAAGCCCTACTTGGCTAACAGAAGAAAGGTTTTTCGGATTCTAGATAACCGTCTTGAAGGCCAGTATTCGTTGGATGTTGCTTTGAAGGCAGCTACACTTGCATTGAGATGTCTCTCAATTGAAGCTAAATTCAGGCCAAACATGGAGGAGGTTGTAAATACACTAGAACAGCTTCAGGTTACCGAAGGCACTCCAACCAATCCAAGTTACGATCACAGGACTCGTAGGCTAGTGCAGATGATGCCTTGA 1146 0.4564 MGACLSARIKAESPWNTGVSSRYVSRDGNDLSSSIRSSTSVPQTPRSEGEILQSPNLRRFSLAELKMATRNFRPDCVLGEGGFGSVFKGWMDENSFAATTPGTGMIIAVKRLKQDGHQGHKEWLAEVNYLGQLTHPNLVKLIGYCLEEEHRLLVYEFMPRGSLESHLFRRGSYFQPLSWSLRLRVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYTAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTIRSDVYSFGVVLLEMLSGRRAIDKNRPYGEQNLMAWAKPYLANRRKVFRILDNRLEGQYSLDVALKAATLALRCLSIEAKFRPNMEEVVNTLEQLQVTEGTPTNPSYDHRTRRLVQMMP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00834 381 CDD STKc_IRAK 78 357 - -
Pte17g00834 381 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Pte17g00834 381 Gene3D Transferase(Phosphotransferase) domain 1 158 374 - -
Pte17g00834 381 Pfam Protein tyrosine and serine/threonine kinase 77 354 IPR001245 GO:0004672|GO:0006468
Pte17g00834 381 Gene3D Phosphorylase Kinase; domain 1 47 157 - -
Pte17g00834 381 MobiDBLite consensus disorder prediction 27 49 - -
Pte17g00834 381 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00834 381 SUPERFAMILY Protein kinase-like (PK-like) 43 354 IPR011009 -
Pte17g00834 381 FunFam Probable serine/threonine-protein kinase PBL8 158 373 - -
Pte17g00834 381 PANTHER OS01G0588500 PROTEIN-RELATED 37 358 - -
Pte17g00834 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pte17g00834 381 FunFam Serine/threonine-protein kinase BIK1 38 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00834 Pte-Chr17 23140482 23143642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00834 48 370 Glycoside Hydrolase AT3G07070 51.077 5.76e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte17g00834 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00834 - - qsa:O6P43_028227 628.246