Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00827 ATGGATCCCAACTTTTCTGGAATTCCTTGTTCTAACCACGTTAACCCACAGAATATTCTGTCCGACTCGAATCAGTTCCCTGTCATGGAACATGTGCATGAATTCGATAAACACTTTTCTGACGATGTCTCTGAGACCACGACTGTTCCTAACCATGATCCTAGAATTGATTCTTTAGTTACACCGCGTGCGGACCTTGTCGGTTTTGGGGCTCAACCTCAAGCAAGTATTGGTGCAGGGGAAAAGTCTTCAGTGCCTCCCTGGAGTGCTAATAATGACGAACTAAGTTTTTATTTGCCGCCTGCAATAATGGGGTTTGCCGCAGACTCTAGCTTCGAGGACAATGACCTTTCAGATACTGTCAAACATATAACTCAGATACTCATGGAGGAGGACATGGAACAAAGGTCTTCCATGTTTTATGACCCTTTGAGTTTGCAGATCACTGAGAAGTCTTTCTATGATGCTCTAGGAGGCAGCTACCCCCTTTCCCCTGATCAGCACCCTCTTGTTTATTTTGATGATAAAGTTGACAGTCCAGATGGTAATGTTTCTGGGACTAGTACTGATTCAGGTAACATTAGCAACGGGTCTAGTAAAACAAGCACCAGCAACACTAGTGATCGTAGTAATTCATGCATCATCAGCTCAAGTGATCCTCTATTGCTAGCCAACTCGTATGACTACAAAACTTTTACACCAGACACCTCTTTGCTTGGAGGCTTGAGTTTCCAGTCAAATTCACAACTGGACTCACGGAAGGTCAATCATCTTCCAAATACTATTGCAAATATAGATGGGTTATTGGACTCTTCTGTCACTGAACTTTTGTCTCGGAATATATTTAGTAACAAAGAATCAGTCTTGCAATTTAAGAGAGGTTTGGAGGAAGCAAGTAAGTTCCTTCCCAAAAATGCTCAACTTACCACTGGTTTAGAGAGCAGTACTTTCCGTCCAGCGTTAACTGGCAAGGCTAATGTACTGCAGAAAGGTGCCATTGTGAGCGAATATTTACCAAACGTGTTAAAGGGAAGAAAGAACCCTGTCCTTGAAGACAGTGATGTTGAAGAAGGGAGAAGTAGAAAGCAGTCTGCAATCTATGTTGAAGAGGCTGAATTATCAGAACTGTTTGACAAAGTTTTACTTGATATTGGACCTCCAATTTGTGCTATAAACCAAGACACTCAGGACTGCTCGAGCAAAGGGTTGCTGCCAATGAAACAGCTTAATGTATCTGATGGAGGGAAGACTCGGCCTAAGAAACAAGGCAGGAAGAAGGAAACTGTAGATTTAAGGAGCCTCCTCCTTTTATGTGCACAAGCAGTGTCTGGTAATGACAGCAGGACTGCATCTGAACTACTAAAGCAGATTAGGCAGCATGCCTCCCCTCTTGGTGATGGTGCACAGAGGCTTGCTCATGTTTTTGCTAATGGGCTTGAGGCACGCCTGGCTGGTAGTGACAACGGAGTCCACATATACTATACCTCCCTAGCTTGCACTAAAATCTCTGCTATTGATATTTTGAAAGCTTACAAGGTCCATGTATCTTTTTGCCCATTCAAGAAATTTGCAATATTCTTCGCAAATAAAATGATCATGAAAGCAGTTGAAAATAGAGACAGTCTTCATATCATTGATTTTGGTATTATATATGGTTTCCAATGGCCAATTCTTATTAAATTTCTTTCCAACAGACCTGAGGGTCCTCCGAAGTTGCGCATTACAGGTATAGAACTTCCCCAAACTGGCTTCCGCCCAAAAGAAAGAATTGAGGAGACTGGTCGTCGACTAGCAACATATTGCAAACGGTTCAATGTTCCATTTGAGTTCAATGCTATAGCATCACAACGATGGGAAACTATACAGATTGAAGAGCTTAAGATTGACAGCAGAGAGGTACTTGCTGTGAATTGTATGTTTAGGTTTCAGAACCTACTTGACGAGACAGTTGAAGTAAACTGCCCTAGAAATGCAGTCCTGAGCTTAATTAGGAAGATGAATCCTGATATTTTTGTGCAAAACATTCTTAATGGAGCTTACAATGCTCCGTTCTTTTTCTCCCGGTTCAAAGAGGCACTTTTTCATTTCTCAGCACTGTTTGATATGTTCGACACTGTTATACCTCGTGAAAGTGAACACAGATTGATGTTTGAGAGAGAGTTTTATGGTCGGGAGGCTATGAATGTCATTGCATGTGAGGGCTTGCAGAGGGTTGAGAGGCCCGAAACATACAAGCAATGGCAGGTTCGACTTACAAGGTGTGGCTTTAGGCAGCTTCCCCTCGATCATCAACTTATTGACAAATTTAGGGATAAATTAAAAGAATGGTACCACAGGGACTTTGCTATTGATGAAGACTGCAACTGGATGCTTCAGGGTTGGAAGGGCCGGGTAATTTATGCTGCTTCATGCTTTGTGCCAGCATAG 2427 0.424 MDPNFSGIPCSNHVNPQNILSDSNQFPVMEHVHEFDKHFSDDVSETTTVPNHDPRIDSLVTPRADLVGFGAQPQASIGAGEKSSVPPWSANNDELSFYLPPAIMGFAADSSFEDNDLSDTVKHITQILMEEDMEQRSSMFYDPLSLQITEKSFYDALGGSYPLSPDQHPLVYFDDKVDSPDGNVSGTSTDSGNISNGSSKTSTSNTSDRSNSCIISSSDPLLLANSYDYKTFTPDTSLLGGLSFQSNSQLDSRKVNHLPNTIANIDGLLDSSVTELLSRNIFSNKESVLQFKRGLEEASKFLPKNAQLTTGLESSTFRPALTGKANVLQKGAIVSEYLPNVLKGRKNPVLEDSDVEEGRSRKQSAIYVEEAELSELFDKVLLDIGPPICAINQDTQDCSSKGLLPMKQLNVSDGGKTRPKKQGRKKETVDLRSLLLLCAQAVSGNDSRTASELLKQIRQHASPLGDGAQRLAHVFANGLEARLAGSDNGVHIYYTSLACTKISAIDILKAYKVHVSFCPFKKFAIFFANKMIMKAVENRDSLHIIDFGIIYGFQWPILIKFLSNRPEGPPKLRITGIELPQTGFRPKERIEETGRRLATYCKRFNVPFEFNAIASQRWETIQIEELKIDSREVLAVNCMFRFQNLLDETVEVNCPRNAVLSLIRKMNPDIFVQNILNGAYNAPFFFSRFKEALFHFSALFDMFDTVIPRESEHRLMFEREFYGREAMNVIACEGLQRVERPETYKQWQVRLTRCGFRQLPLDHQLIDKFRDKLKEWYHRDFAIDEDCNWMLQGWKGRVIYAASCFVPA* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00827 808 MobiDBLite consensus disorder prediction 173 211 - -
Pte17g00827 808 MobiDBLite consensus disorder prediction 181 211 - -
Pte17g00827 808 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 358 799 IPR005202 -
Pte17g00827 808 Pfam GRAS domain family 431 804 IPR005202 -
Pte17g00827 808 ProSiteProfiles GRAS family profile. 422 806 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00827 Pte-Chr17 23079839 23084410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00827 120 808 GRAS Transcription Factor Family AT1G07530 49.440 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte17g00827 GRAS 8.5e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00827 - - pcin:129314564 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00827 17 23079839 23084410 Pte17g00827 17 23079839 23084410 RCT
Pte1g01814 1 39436658 39440019 Pte17g00827 17 23079839 23084410 RCT