Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00826 ATGGGTCATACGGATTCCCTTCTTCAAGAAGTTCCTGGAGTCAGTAATATATTTCAGTTTAAAAATAGCCCCTATTTTCAGAAAGTTGGAGGGAATGGTTTTACTGTTCCTCATAGATCCAATGATTCATCTCTCCCTCCAACTTATGTACAACCTTCTAGTAGTTCAAGTCCATCTCCTGATATGAGCTCAGATTTCGACTATCCTGACAGTGATAAATTCTCCAGTCCTATTCTCAAATACATAAATGATGTACTGATGGAAGAAGAAGACTTAGAGCGTAAACCCTGTATGTTACAGGACTGCCTGGCCCTTCAGGCAGCTGAAAGATCTTTATATGATGTCATTGGTCAGAGTTATCCTCCACCCTGTGAAACGTTCGCTCACTATTTCAATGATGGAAATTTAGATAATCCAGATAGCAATACTGTCAGTACCTTCAGTACAGGTAGCAGTAGCAGCCACTGTAGTAACTTTTCTAGTGAATCCAATTGGAATTGTAAAATGGGTGTCTTTGATTCGTCTCCCGCATATTCATCTCTACTTGATTCTCCTCCACAGACTGCCCTGTTAGCTGATGTAGGTCCTAACTTGTCCTGTGGTATACAACCAGCTATACATATCAAAGGAGGAAACTTTGAGATGATTGACTTAGAGGCAAGCCCACCGATTAGTTCAGAGCATGAGGAGTCAGCTGGGAATATGGTGGAAAAGGTAAAGAAGGATGTGAGCTACAGGTCAGAGGGTGAATTCGGCGAAAAGAAGACTCATCAGAGGGAAGAGAATGATTATGAAGGAGTTAGGAGCACAAAGCATTCAGCAGTTTATCATGAGAACTGTCCTGCACGAGAGATGCTTGATGATGTGCTTCTCTATCAGGCTGAGAAGACTACTACTGTTTCACCTGATGATGGCGACAACAACTCACGCAAGGGGAAGCCCCAGCAGAATGGGCAGTCAAAAGGATCCCATGGAAAGACAAGGTCTAAGAAGCAAGCTAGTAAGGGAGAAATAGTAGATTTGTGGACTTTTCTAACTCAGTGTGCTCAAGCCGTGGCTTGTCATGACCAGAGAACTGCAATCGACTTGCTGAAGCAGATAAGGCAACATTCATCGCCATATGGTGATGGATTGCAAAGACTGGCTCATTACTTTGCTAATGGACTGGAGACACGTTTGGAAGCAGGCTCACCGTCCTACTTGCCATATGTTAGTGATGGAGCAACAGCTGCTGATATCTTAAAAGCTTATAAGTTATATATAACATCGTGCCCATTCAAAAGGATGTCCAATTTCCTGGCAAATCGGACAATCACGAAGGTTGCAGAGAAAGCCACAAGGCTCCATATTATTGATTTTGGCATTCTTTATGGTTTTCAGTGGCCTTGCCTTATTCAACGTCTTTCCGGAAGACAAGGTGGTCCTCCCGTGCTTCGAATTACAGCGGTGGAGCTTCCCCAACCTGGATTTCGCCCTTCAGAGAGGGTAGAGAAGACAGGCAAGTGCTTAGCAAAATATTGCAGGAGATTCAATGTCCCTTTTGAATACAACGTCATAGCAAAAAAATGGGAAACCGTCCAACTTGAGGATCTCGAAATAGACAGGAGGGAAGTGACTGTAGTTAACTGCTTGTACCGATTGAAGAACCTGCCAGATGAAACAGTCGCGGCTAACAGCCCAAGGGATGAAGTTCTGAGGCTGATCAGGAGAATCCATCCGGATATCTTCATTCATGGAGTTGTAAATGGCACATACAGTGCTCCATTTTTCACCACACGGTTTAGGGAGGCACTCTTTCACTTCTCTTCGTTGTTTGACATGTTTGAGGCTACTGTCTCACGTGAAGATCCACAAAGACTAATGTTTGAGAAAGAGGTATTTGCTAGGGATGCTATGAACGTGATAGCACGTGAAGGTGCAGCTAGGGTTGAAAGGCCAGAAACCTACAAGCAATGGCAACTCAGAAATCAAAGAGCTGGGTTCAAGCAAATCCCTTTGTACCAAGAAATCGTGAACAAAGTGAAAGAGATAGTGAGATTGGAATACCACAAAGATTTTGTAGTTAATGAAGATGGCAAGTGGATGCTTCAAGGATGGAAAGGCCGTATAGTTCATGCTATTTCTTGTTGGAGACCTGTGTAG 2142 0.4346 MGHTDSLLQEVPGVSNIFQFKNSPYFQKVGGNGFTVPHRSNDSSLPPTYVQPSSSSSPSPDMSSDFDYPDSDKFSSPILKYINDVLMEEEDLERKPCMLQDCLALQAAERSLYDVIGQSYPPPCETFAHYFNDGNLDNPDSNTVSTFSTGSSSSHCSNFSSESNWNCKMGVFDSSPAYSSLLDSPPQTALLADVGPNLSCGIQPAIHIKGGNFEMIDLEASPPISSEHEESAGNMVEKVKKDVSYRSEGEFGEKKTHQREENDYEGVRSTKHSAVYHENCPAREMLDDVLLYQAEKTTTVSPDDGDNNSRKGKPQQNGQSKGSHGKTRSKKQASKGEIVDLWTFLTQCAQAVACHDQRTAIDLLKQIRQHSSPYGDGLQRLAHYFANGLETRLEAGSPSYLPYVSDGATAADILKAYKLYITSCPFKRMSNFLANRTITKVAEKATRLHIIDFGILYGFQWPCLIQRLSGRQGGPPVLRITAVELPQPGFRPSERVEKTGKCLAKYCRRFNVPFEYNVIAKKWETVQLEDLEIDRREVTVVNCLYRLKNLPDETVAANSPRDEVLRLIRRIHPDIFIHGVVNGTYSAPFFTTRFREALFHFSSLFDMFEATVSREDPQRLMFEKEVFARDAMNVIAREGAARVERPETYKQWQLRNQRAGFKQIPLYQEIVNKVKEIVRLEYHKDFVVNEDGKWMLQGWKGRIVHAISCWRPV* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00826 713 Pfam GRAS domain family 344 711 IPR005202 -
Pte17g00826 713 ProSiteProfiles GRAS family profile. 332 711 IPR005202 -
Pte17g00826 713 MobiDBLite consensus disorder prediction 298 333 - -
Pte17g00826 713 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 279 701 IPR005202 -
Pte17g00826 713 MobiDBLite consensus disorder prediction 298 323 - -
Pte17g00826 713 MobiDBLite consensus disorder prediction 31 71 - -
Pte17g00826 713 MobiDBLite consensus disorder prediction 246 268 - -
Pte17g00826 713 MobiDBLite consensus disorder prediction 31 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00826 Pte-Chr17 23062211 23065082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00826 70 714 GRAS Transcription Factor Family AT2G29060 45.706 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte17g00826 GRAS 1.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00826 - - qsa:O6P43_028216 765.377