Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00808 ATGGATCTCCAGAAAAATTTGGAGAAAGATCTTCATGATATGAGGGTGTACTTCAGTAGTGGAAGAACTAGAGAAGCGTCTTGGAGGGCAGCTCAGCTTCTTGGATTGAGCACTTTCCTCAGTGAGAAGGCAGGAGACATTGTGAGTGCACTCAAACAAGACTTAGGCAAACATTATGCTGAAGCTTTCAGAGATGAGATAGGAACTCTGGGCAAGTCATTGAATTTGGCAAAGGTGTCTTTGAAAGCATGGATGTCTCCCAGGAAGGTTAACTTGCCAAAAATAGCATTGCTCTCAAGTGCAGAAATTGTTCCTGAGCCTCTAGGCCTTGTCCTCATATTCTCATCTTGGAATTTTCCTTTTGGTCTATCTTTGGAATCACTTATAGGAGCCATTGCTGCAGGCAATACAGTGGTTCTAAAACCTTCAGAACTGGCTCCTGCGAGCTGTCATATTCTGACCACTTCCATGCCGTCTTACTTGGATAGTAGAGCTATCAAAGTTGTTGAAGGTGGATCGGAGATGGGTGAACAATTACTACAGCATAAATGGGACAAGATCTTCTTCACCGGAAGTCCACGTGTGGGGCGGATGGTGATGTCTGCAGCTGCGAATCATTTGACGCCTGTGACTTTGGAGCTAGGTGGAAAGTGCCCTGCTGTGGTTGATTCACTTTCGTTTTCGTGGGATAAAGAGGCTGCTGTGAAACGAATCCTAGTGGGGAAATTTGGGACTTGTGCTGGTCAAGCATGCATAGCAATTGATTATGTCTTGGTGGAAAGGAAATTCAGTTCTGCCCTGGTCGAGCAGATGAAGGAATGGATCAAGAAAATGTTTGGGGAAAATCCTGGAGAGTCAAACAGTGTTGCAAGGATTGTTAGCAAACAACAATTTTCAAGACTAAAGGAACTGCTTCACGATCCAGATGTTAGACGTACTATAATTTCTGGTGGTTCATTAGACGAAGACAACTTGTTCATTGAGCCAACTATATTGCTGGATCCACCCCTTGAATCAAAAATCATGAACGAAGAGATATTTGGTCCCTTACTTCCAATCATAACGCTTGACAAGATTGAAGACAGTATTCCATTCATAAAGTCAAGGCCAAAACCTCTTGCTCTCTACATGTTCTCCAAAGACAAAACACTGCAGAGAAGGATGGAGTATGAAACATCATCTGGGAGTTTGGTAATCAACGACGCAATAATACAATATGCAGCTGATACACTCCCATTTGGAGGAGTGGGTGAAAGCGGATTCGGAAACTACCATGGGAAGTTTTCCTTTGACACATTCAGCCACATGAAGGCCGTAGCAAGAAGAAGTTTTCTCTCTGATTTTTGGTTTAGATATCCTCCATGGAACGATTATAAGTTGCTGTTACTTGACGCAGCCTACAACTTTGATTACATCGGATTGCTCCTCGTAATCCTAAGACTGAGGAGAAAGAAACCAGCATCAGTTGCTTCATTAAACTAA 1482 0.4305 MDLQKNLEKDLHDMRVYFSSGRTREASWRAAQLLGLSTFLSEKAGDIVSALKQDLGKHYAEAFRDEIGTLGKSLNLAKVSLKAWMSPRKVNLPKIALLSSAEIVPEPLGLVLIFSSWNFPFGLSLESLIGAIAAGNTVVLKPSELAPASCHILTTSMPSYLDSRAIKVVEGGSEMGEQLLQHKWDKIFFTGSPRVGRMVMSAAANHLTPVTLELGGKCPAVVDSLSFSWDKEAAVKRILVGKFGTCAGQACIAIDYVLVERKFSSALVEQMKEWIKKMFGENPGESNSVARIVSKQQFSRLKELLHDPDVRRTIISGGSLDEDNLFIEPTILLDPPLESKIMNEEIFGPLLPIITLDKIEDSIPFIKSRPKPLALYMFSKDKTLQRRMEYETSSGSLVINDAIIQYAADTLPFGGVGESGFGNYHGKFSFDTFSHMKAVARRSFLSDFWFRYPPWNDYKLLLLDAAYNFDYIGLLLVILRLRRKKPASVASLN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00808 493 PIRSF ALDH 2 478 IPR012394 GO:0006081
Pte17g00808 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Pte17g00808 493 SUPERFAMILY ALDH-like 15 455 IPR016161 GO:0016491
Pte17g00808 493 FunFam Aldehyde dehydrogenase 216 419 - -
Pte17g00808 493 PANTHER ALDEHYDE DEHYDROGENASE 4 474 IPR012394 GO:0006081
Pte17g00808 493 Pfam Aldehyde dehydrogenase family 18 439 IPR015590 GO:0016491
Pte17g00808 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 17 437 IPR016162 GO:0016491
Pte17g00808 493 FunFam Aldehyde dehydrogenase 15 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00808 Pte-Chr17 22752545 22756166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00808 3 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.015 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00808 K00128 - qsa:O6P43_000141 707.983