Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00804 ATGGGAGCACGTTGTTCTAAATTCTCCCTTTGCTGGTGGCCTTCCCATATCAAACCGAATCCTAATGCCTCATCTGATACTGATGATGGTGATAAGAATGTGAAGGATTCATTGCCTGGGTTCAAAGAGTTCACCTTGACTCAGCTCAGAGAAGCCACCTCTGGGTTTTCACGTGAGAACATTGTATCAGAGCACGGAGAGAAGGCTCCCAATGTTGTCTACAAAGGGAAGTTTGAGGCTGATGATATGTGGGTCGCTGTTAAGCGATTTAACAGGTCAGCTTGGCCTGATTCTAAACAATTCCTGGAGGAAGCAAGAGTGGTTGGTCAGTTGAGGAGTGAGAGGTTGGCTAATCTTATTGGATGTTGCTGCGAAGGTGAAGAGAGATTATTGGTCGCAGAGTTCATGCCTAATGAAACTCTTTCCAAACATCTTTTCCACTGGGAGACCCAGCCGATGAAATGGGCCATGAGGCTGAGAGTAGCTCTGTATTTGGCGCAAGCGTTGGATTACTGCAGCAGCAGAGGGAGAGCTTTGTATCATGATCTCAATGCCTATAGAATTCTATTTGATCAGGATGGTAATCCTAGGCTCTCCTGCTTCGGACTCATGAAAAACAGCAGGGATGGCAAGAGTTATAGTACAAATTTAGCTTTCACCCCTCCAGAGTACTTGAGAACAGGAAGCATTACTTCTGAAAGTGTGGTGTTCAGTTTCGGTACTCTCTTGCTTGATCTTCTCAGTGGCAAACACATCCCTCCGAGTCATGCGCTTGATCTGATACGAGGAAAGAATTTTCAGACGCTGATGGATTCATGTTTGGTTGGTCATTTCTCAAATGACGATGGAACTGAGTTAGTTAGGTTAGCTTCTCGCTGTTTACAGTATGAACCCCGTGAGAGGCCCCATACCAAATCTATTGGGACTGCTCTAACTCCACTTCAAAAGGAAATAGGGGTCCCATCACACGTGTTGTTGGGTATACCACACAGAAGCAAATCATTGCAAAAGGTTTCATTGACACCTTTTGCTGAAGCTTCTTCAAGAGGAGATCTCACTGCAATACACGAAATTCTGGAAAAGGTCGGATACAAGGACGATGAAGGAGTTGCGAAAGAGCTCTCGTTCCAAATGTGGACCAATCAAATCCAAGAAACCCTGAATTCTAAGAAGCGGGGAGATGCTGCTTTTCGGGCGAAGGATTTTTCAACAGCCATTGATTGCTACACACAATTCATAGATGGAGGAACAATGATATCACCAACAGTGTATGCTAGGCGGTGCTTATGCTATCTAATGATTGATTTGCCACAAGAAGCTCTGGGAGATGCTATGGAAGCCCAGACAATAGCCCCAGACTGGCCAACTGCATTTTATCTTCAAGCTGCAGCCCTACTCAGTCTTGGGATGAAAAATGAGGCGGAAGAAAGTCTGAAAGACGGTACAACACTTGAAGCAAGAAAACTTTAA 1470 0.4497 MGARCSKFSLCWWPSHIKPNPNASSDTDDGDKNVKDSLPGFKEFTLTQLREATSGFSRENIVSEHGEKAPNVVYKGKFEADDMWVAVKRFNRSAWPDSKQFLEEARVVGQLRSERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALYLAQALDYCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGSITSESVVFSFGTLLLDLLSGKHIPPSHALDLIRGKNFQTLMDSCLVGHFSNDDGTELVRLASRCLQYEPRERPHTKSIGTALTPLQKEIGVPSHVLLGIPHRSKSLQKVSLTPFAEASSRGDLTAIHEILEKVGYKDDEGVAKELSFQMWTNQIQETLNSKKRGDAAFRAKDFSTAIDCYTQFIDGGTMISPTVYARRCLCYLMIDLPQEALGDAMEAQTIAPDWPTAFYLQAAALLSLGMKNEAEESLKDGTTLEARKL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00804 489 ProSiteProfiles Protein kinase domain profile. 59 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00804 489 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Pte17g00804 489 Pfam Protein tyrosine and serine/threonine kinase 72 308 IPR001245 GO:0004672|GO:0006468
Pte17g00804 489 SUPERFAMILY TPR-like 390 481 IPR011990 GO:0005515
Pte17g00804 489 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Pte17g00804 489 FunFam probable serine/threonine-protein kinase At4g35230 31 135 - -
Pte17g00804 489 FunFam probable serine/threonine-protein kinase At4g35230 384 489 - -
Pte17g00804 489 SUPERFAMILY Protein kinase-like (PK-like) 36 312 IPR011009 -
Pte17g00804 489 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Pte17g00804 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 488 IPR045845 GO:0004672|GO:0009742
Pte17g00804 489 Gene3D Tetratricopeptide repeat domain 384 489 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00804 Pte-Chr17 22687526 22692091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00804 22 330 Glycoside Hydrolase AT3G07070 32.440 1.53e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte17g00804 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00804 - - qsa:O6P43_028162 837.025