Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00797 ATGACTACTGAAGAGAAGCTTCACCTGTGTTCAAGCACGCCAGGAAATATCAGCACATCAAACTTGAATATAGAAGGAGCACACATGCATGTAATTACAGACTTCATTCAATCTATTGGGGTGATGATTGCTGGAGCTATAATATGGGCAAGACCAAATTGGTTAGTGGTTGATTTGCTATGTACTTTCGTTTTCTCTGTTCTTTCCTTAAGTACAACTAAACCCATGCTGAAGAGTATATGTGGCATATTGATGGAGGGAACGCCGCCAGAGATCTGTATAACTAACCTTGAAAATGGCCTCAAGCGTATCCATGGTGTGTTGGATATTCACGACCTACATGTTTGGTCTATAACGACAGGAAAAATTGTACTCTCGTGTCATGCGTTTGCTGATCCTGGCATTACCTCTAGAGATCTAATTCATAGAATTAAAGATTACTGTGAGAAGGTACACAAGATACGACATGTAACAATTGAAACTGAATAG 489 0.3967 MTTEEKLHLCSSTPGNISTSNLNIEGAHMHVITDFIQSIGVMIAGAIIWARPNWLVVDLLCTFVFSVLSLSTTKPMLKSICGILMEGTPPEICITNLENGLKRIHGVLDIHDLHVWSITTGKIVLSCHAFADPGITSRDLIHRIKDYCEKVHKIRHVTIETE* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00797 162 Pfam Cation efflux family 20 85 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte17g00797 162 NCBIfam cation diffusion facilitator family transporter 18 162 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte17g00797 162 Gene3D Cation efflux protein transmembrane domain 7 84 IPR027469 -
Pte17g00797 162 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 89 162 IPR036837 -
Pte17g00797 162 SUPERFAMILY Cation efflux protein transmembrane domain-like 18 86 IPR027469 -
Pte17g00797 162 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 19 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00797 Pte-Chr17 22621973 22622461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00797 21 162 Inorganic Solute Cotransporters AT2G29410 51.408 8.48e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00797 K14689 - csav:115718403 217.624