Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00794 ATGGCACAACAAGGGCAGATGACCATAGAGCCAGCCATTCTGGATGACATTATCAATAGGCTTTTGGAGTTTCGACATGGGAGACCTGTCAAGCAGGTACAGCTTATGGAAGGAGAGATCCGTCAACTCTGTGTTGTTTCCAGAGAAATCTTCCTTCAACAGCCTATTCTCCTTGAGCTCGAGGCACCCATTAAGATTTGCGGTGACATTCATGGACAATATGCTGATCTTTTGAGGCTTTTCGAATATGGTGGTTTGCCTCCAAATGCCAATTATCTCTTCCTCGGTGACTATGTTGATCGTGGGAAACAAAGTCTGGAAACGATATGCCTCCTTCTTGCCTATAAGATCAAATACCCTGAGAATTTCTTTCTTTTGAGAGGAAACCATGAATGTTCTTCAATCAATCGTATATATGGGTTTTATGATGAATGCAAACGCCGTTTCAATGTGCGCCTATGGAAAACTTTTACCGAGTGTTTTAACTGTCTTCCTGTTGCTGCTCTCATAGATGAGAAGATATTATGCATGCACGGTGGCCTATCCCCTGACTTGACAAATTTGGACCAAATTAGGAACTTACCGCGTCCTACTGATGTTCCAGAATCTGGTTTGATTTGTGATTTACTTTGGTCTGATCCTGGTAGAGATGTCAAAGGCTGGGGAATGAATGACAGGGGTGTCTCATACACATTTGGTGCAGACAAGGTGTCTGAGTTCTTAAACAAGAATGATATGGACCTTGTATGCCGTGCCCATCAGGTTGTTGAGGATGGCTATGAATTCTTCGCTGACAGGCAGCTTGTCACTATATTTTCTGCTCCCAATTACTGCGGTGAATTTGATAATGCTGGTGCTATGATGAGTGTCGATGAAAGCTTAATGTGCTCTTTCCAGATTCTTAAACCAGCAGATAAAAGATCAAGGTTCTGA 933 0.4277 MAQQGQMTIEPAILDDIINRLLEFRHGRPVKQVQLMEGEIRQLCVVSREIFLQQPILLELEAPIKICGDIHGQYADLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECSSINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLTNLDQIRNLPRPTDVPESGLICDLLWSDPGRDVKGWGMNDRGVSYTFGADKVSEFLNKNDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPADKRSRF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00794 310 Gene3D - 6 310 IPR029052 -
Pte17g00794 310 CDD MPP_PP1_PPKL 14 303 - -
Pte17g00794 310 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Pte17g00794 310 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Pte17g00794 310 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Pte17g00794 310 FunFam Serine/threonine-protein phosphatase 60 310 - -
Pte17g00794 310 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Pte17g00794 310 SUPERFAMILY Metallo-dependent phosphatases 20 306 IPR029052 -
Pte17g00794 310 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 307 - -
Pte17g00794 310 SMART pp2a_7 35 305 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00794 Pte-Chr17 22601011 22603391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00794 64 251 Calmodulin-binding Proteins AT5G63870 32.589 5.71e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00794 K06269 - qsa:O6P43_000164 600.897