Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00792 ATGTTGAGTGAAGAAGATAGGTTGATTGAGGAGTGGAGTGTGGGTGAGGGGTTAGGAATGGCTGAGATCTGTTGTGGAGTGATGAGTGACCAAGAGGCTTCGGCTTCGGCTTCGGCTTCGGTTTCCGACACTTGCGTCAAGCACAGCTCTAGAGCTTCAAGGCGGAGGAGAATGGAGTTGAGGCGCTGCAAATTTCAGCAAGGGATGACAGTTGCACCTGGTCATGCACCACAAAATGAGAACGAGAGAAAAGAGAAGGTAGGGGTTCACTCTTTATTACGGGATTGTGAGAACGCTCAGGAGAACAGGGATGATTCTGATGACATAGCTCAAGACGGTGTTGCCTCAGTTCTTGAGCAGGAAGTTGAGAGATCGGAGGCACAACATAACAAAGTGATGATGGGTTTCTCACTACCACAATTGCCGGAAACTCTTGTCACCGACTTTGCTAAGTTTGGAGTGGTATCCGTTTGTGGAAGAAGAAGAGAGATGGAGGATGCGGTGGCCGTTCACCCTTCATTCTATCGTGAACACCACACGGCAACTAAATTGCACTATTTTGGTGTGTACGATGGCCATGGCTGCTCTCATGTGGCGAGCAGGTGCAGGGAACGGTTGCATGAGCTGGTGAAGGAGGAGCTGGTAAGAGAGGAGGTGGTGTCAATGGGGTGGAAGAGTGTGATGCAGCGAAGCTTTTTACTGATGGACATGGAGGTGACTGCTAGCAACGGAAGCGGTCTGGGAGCCACGTGTAGATGTGAGCTTCAGTCACCTGAGTGTGATGCTGTTGGTTCCACGGCCGTTGTGTCAATTTTGACTCACGATAAGATCATCGTTGCTAATTGTGGGGATTCCAGGGCCGTCCTGTGTCGCAATGGCAAGCCCATACCTCTTTCTTCCGATCACAAGCCGGACCGTCCCGATGAGTTGAACCGGATCGAAGCTGCCGGCGGAAGAGTTATATACTGGGATGGGGCACGAGTTTTAGGAATGCTGGCCATGTCAAGATCCATAGGTGATAATTATTTAAAGCCTTACGTGACTTGTGAGCCAGAAGTGACCATAACTGATCGAACTGGAGAGGATGAGTGTTTGATACTGGCAAGCGATGGACTTTGGGACGTGGTATCCAACGAAATGGCATGTGGGGTGGCACACATGTGTTTGAAAGGAAAGGCGGACGCAACTCCAACTGCGGAAGGCGAAATGGAAACACGCGGAAGCTCCTCTATGTTTGAAACACTGGACAAAGCAAGCTCTGAAGCGTCCATGTTGCTGACCAAGTTAGCTTTGGCCAGACACAGTACTGACAACATCAGTGTTGTCATGATTAATCTCATAGGAGACACGTAG 1353 0.4996 MLSEEDRLIEEWSVGEGLGMAEICCGVMSDQEASASASASVSDTCVKHSSRASRRRRMELRRCKFQQGMTVAPGHAPQNENERKEKVGVHSLLRDCENAQENRDDSDDIAQDGVASVLEQEVERSEAQHNKVMMGFSLPQLPETLVTDFAKFGVVSVCGRRREMEDAVAVHPSFYREHHTATKLHYFGVYDGHGCSHVASRCRERLHELVKEELVREEVVSMGWKSVMQRSFLLMDMEVTASNGSGLGATCRCELQSPECDAVGSTAVVSILTHDKIIVANCGDSRAVLCRNGKPIPLSSDHKPDRPDELNRIEAAGGRVIYWDGARVLGMLAMSRSIGDNYLKPYVTCEPEVTITDRTGEDECLILASDGLWDVVSNEMACGVAHMCLKGKADATPTAEGEMETRGSSSMFETLDKASSEASMLLTKLALARHSTDNISVVMINLIGDT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00792 450 PANTHER PROTEIN PHOSPHATASE 110 445 IPR015655 GO:0004722|GO:0006470
Pte17g00792 450 CDD PP2Cc 151 446 IPR001932 -
Pte17g00792 450 FunFam Protein phosphatase 2C 50 149 449 - -
Pte17g00792 450 SMART PP2C_4 138 444 IPR001932 -
Pte17g00792 450 SUPERFAMILY PP2C-like 149 446 IPR036457 -
Pte17g00792 450 ProSitePatterns PPM-type phosphatase domain signature. 186 194 IPR000222 GO:0043169
Pte17g00792 450 ProSiteProfiles PPM-type phosphatase domain profile. 151 446 IPR001932 -
Pte17g00792 450 Gene3D - 144 448 IPR036457 -
Pte17g00792 450 Pfam Protein phosphatase 2C 151 439 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00792 Pte-Chr17 22510296 22512258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00792 116 446 PP2C-type Phosphatase Gene Family AT2G29380 59.706 2.70e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00792 K14497 - cave:132163544 483.026