Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00788 ATGACAGATTATGGAACTTGCGGTGGTAGTGGAGGTGGAGGTGGCTGTGGAAGTGGTGGCGGTAGTGATGAAGAGCGAGTTTTGGAGTGGGAAGTTGGTCTTCCCAGTGCTGACGATCTTACTCCGTTGTCTCAACGCTTGATCCCGCCGGAACTTGCTTCTGCTTTCAGTATTACACCGGAGCCTTGTCGGACGGTCCTGGATGTGAATCGTGCTTCGCAGAATACCTTATCGACCATTTGTCGAGGAAGCTCACAGGGTTTCTCTTCAAACAATTTCAAGCCTTTGGATGATGATCGGAGTCGTGACCCGATGGTTATGGAAATTGATGAAGGGGTTGACCAAGATGGGCAAGCTGCGGATTCTAGGAAATTGAGAAAGGTTGATTCTGTTGAAGAAGCTGATTCAGCTTTAAGAACTGATAATCCCACCGATGACCCATCTGTCAGGACCTTGAAGCGACCACGGCTTGTCTGGACACCACAGCTGCATAAGAGATTCGTAGATGTAGTAGCTCATCTGGGGATTAAGAACGCTGTGCCAAAAACTATTATGCAATTGATGAATGTTGAAGGATTGACCAGAGAAAATGTTGCCAGTCATCTCCAAAAATATAGACTTTACTTGAAGAGGATGCAGGGTTTGTCAAACGATGGCCCCTCCTCATCGGACCATCTCTTTGCCTCCACGCCAGTGCCGCAGAGCTTGCATGAGTCAGGTGGAAATGGGCATATGCCAATGCCAATGCCAATGCCAATTCCAATGCCTTATCCACCTCAAATGAATATGATGCCTATGCCGGTTATTGGGATGGCTAATGGCCATAGTCATAGTCATGGTCAAGCACAGATGGGAATGCCTTTGGGTAATCCAAATGGCACGGCAGGGTACCCCGGCTTTGAAGCACTTCAGTATAATAGGTTGCAGCACAAGGACTGGTCTGGCAATAATTTTGGCTCTGTTATTTCGTACCCGCATCACGTTGCCCCTAATGAAAAGTGA 1002 0.478 MTDYGTCGGSGGGGGCGSGGGSDEERVLEWEVGLPSADDLTPLSQRLIPPELASAFSITPEPCRTVLDVNRASQNTLSTICRGSSQGFSSNNFKPLDDDRSRDPMVMEIDEGVDQDGQAADSRKLRKVDSVEEADSALRTDNPTDDPSVRTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDGPSSSDHLFASTPVPQSLHESGGNGHMPMPMPMPIPMPYPPQMNMMPMPVIGMANGHSHSHGQAQMGMPLGNPNGTAGYPGFEALQYNRLQHKDWSGNNFGSVISYPHHVAPNEK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00788 333 MobiDBLite consensus disorder prediction 1 26 - -
Pte17g00788 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 210 IPR017930 -
Pte17g00788 333 MobiDBLite consensus disorder prediction 216 237 - -
Pte17g00788 333 SUPERFAMILY Homeodomain-like 151 211 IPR009057 -
Pte17g00788 333 Gene3D - 151 213 - -
Pte17g00788 333 Pfam Myb-like DNA-binding domain 158 206 IPR001005 -
Pte17g00788 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 155 207 IPR006447 GO:0003677
Pte17g00788 333 MobiDBLite consensus disorder prediction 116 149 - -
Pte17g00788 333 FunFam Two-component response regulator 150 213 - -
Pte17g00788 333 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 317 IPR044841 GO:0003700|GO:0006355
Pte17g00788 333 MobiDBLite consensus disorder prediction 111 149 - -
Pte17g00788 333 MobiDBLite consensus disorder prediction 216 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00788 Pte-Chr17 22413162 22414385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00788 23 279 G2-like Transcription Factor Family AT3G46640 56.410 1.05e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte17g00788 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00788 - - zju:107411020 447.588