Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g00785 | ATGAATATCCCGGCAGACAGCGAAGTTCCAAAAGTTGCTGATTTTCTTGGTGTGAGCAAGTCAGAGCATCGGTCAGATCTTGTGGCCTTCGATGAAATTCAACCCTCTGATTCAGGTTACTTATTCTCAAATACCAGTATGATTCCGGTTCAGAACTCATCATCAGTCGCTACATCTGGCAGCTACGAATTTCAAGAAACCGCGAGCAGTAATAGTCAGACTTTGACATTGTCAATGGGTAGTGGCAAAGTTTCAGCAAGTGAAACCAGTGGTGATAAGAGTACAATCGTAAGCATAGTTGAACCCACACCAAAACGGACTTCGGATACCTTCGGCCAAAGGACATCTATATATCGTGGTGTAACAAGACATAGATGGACTGGTAGGTATGAGGCTCACCTTTGGGACAATAGCTGTAGGAGAGAAGGGCAATCAAGAAAAGGGCGACAAGTATTAATTGCTATTATAACTATTGTGGAAGGTGGCTATGACAAGGAGGACAAAGCAGCTAGGGCTTATGATCTTGCTGCTCTAAAGTATTGGGGGCCATCAACTACTACAAACTTTCCAGTAAATAACTATGAGAAGGAATTGGAGGAAATGAAGCATATGACTAGACAAGAATTTGTGGCCGCCATCAGAAGGAAGAGCAGTGGTTTTTCTAGGGGTGCTTCTATGTATCGTGGAGTGACAAGGCATCACCAACATGGAAGATGGCAAGCACGGATTGGCAGAGTTGCAGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAAGAAGAAGCTGCAGAAGCTTATGACGTAGCTGCAATTAAATTTAGAGGCTTAAGCGCTGTGACTAACTTTGACATGAATCGTTATGATGTTAAGAGCATCCTTGAAAGTAACACTCTCCCAATCGGAGGAGGGGCAGCTAAGCGGCTAAAGGAGGCTCAAGCCCTCGAATCTTCTAGGAAACGTGAAGAGATAATTGCCCTAGGTTCAAGCTTCTCCTATGGAAGCTCAAGCTCTAGCAGACTACAAGGATATTCTCTAATGCAACATCATTTTGATCAGCCTCAGCCTTTGCTTAGCCTACACAGTCAGGATATTACACCATATTCGCATGATCCTTCATTTCATCACAGTAACTACATTCAAGCCCATCTGCAACTGCACCAGCAAAGTTCAGGTTCTAATTATCTACAACACCACCCATCGCACAATGCACAACTTTACAACAACTTTCTTCAGGCTAATCCAGCTTTGGTTCAAGGGTTAATGAACATGGGATCCTCCCCTTCATTGATTGAGAGCTCTAGTGGGAGTACTTATAATACTGATGGATTTTTGGGAAACAGCCTTGGGATAACATCTAATTCCACAGTTGGTACAGGCAACGTTGGGGAACTTGCTATGGTTAAGGTTGACTATGATGACATGCCGGCTGGAAATTATGGAGGCTGGTCCGGTGACTCCGTCCAAGGGTCAAGTGCTGGTGGAGTTTTCACAATGTGGAATGAGTAG | 1509 | 0.4394 | MNIPADSEVPKVADFLGVSKSEHRSDLVAFDEIQPSDSGYLFSNTSMIPVQNSSSVATSGSYEFQETASSNSQTLTLSMGSGKVSASETSGDKSTIVSIVEPTPKRTSDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVLIAIITIVEGGYDKEDKAARAYDLAALKYWGPSTTTNFPVNNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDVAAIKFRGLSAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQALESSRKREEIIALGSSFSYGSSSSSRLQGYSLMQHHFDQPQPLLSLHSQDITPYSHDPSFHHSNYIQAHLQLHQQSSGSNYLQHHPSHNAQLYNNFLQANPALVQGLMNMGSSPSLIESSSGSTYNTDGFLGNSLGITSNSTVGTGNVGELAMVKVDYDDMPAGNYGGWSGDSVQGSSAGGVFTMWNE* | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g00785 | 502 | Pfam | AP2 domain | 117 | 182 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | Pfam | AP2 domain | 227 | 276 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | ProSiteProfiles | AP2/ERF domain profile. | 117 | 190 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | CDD | AP2 | 225 | 284 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | SUPERFAMILY | DNA-binding domain | 116 | 192 | IPR016177 | GO:0003677 | |
Pte17g00785 | 502 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 38 | 378 | - | - | |
Pte17g00785 | 502 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 116 | 192 | - | - | |
Pte17g00785 | 502 | PRINTS | Ethylene responsive element binding protein signature | 118 | 129 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | PRINTS | Ethylene responsive element binding protein signature | 266 | 286 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | SMART | rav1_2 | 226 | 290 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | SMART | rav1_2 | 117 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | ProSiteProfiles | AP2/ERF domain profile. | 226 | 284 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | Gene3D | AP2/ERF domain | 226 | 286 | IPR036955 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | Gene3D | AP2/ERF domain | 117 | 192 | IPR036955 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | FunFam | AP2-like ethylene-responsive transcription factor | 225 | 286 | - | - | |
Pte17g00785 | 502 | CDD | AP2 | 116 | 192 | IPR001471 | GO:0003700|GO:0006355 | |
Pte17g00785 | 502 | SUPERFAMILY | DNA-binding domain | 225 | 285 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g00785 | Pte-Chr17 | 22373526 | 22376104 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g00785 | 9 | 503 | AP2-EREBP Transcription Factor Family | AT3G20840 | 62.684 | 0.0 | 585 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Pte17g00785 | AP2 | 1.5e-05 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g00785 | K09285 | - | pvy:116115844 | 696.812 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte17g00785 | 17 | 22373526 | 22376104 | Pte17g00785 | 17 | 22373526 | 22376104 | RCT |