Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00785 ATGAATATCCCGGCAGACAGCGAAGTTCCAAAAGTTGCTGATTTTCTTGGTGTGAGCAAGTCAGAGCATCGGTCAGATCTTGTGGCCTTCGATGAAATTCAACCCTCTGATTCAGGTTACTTATTCTCAAATACCAGTATGATTCCGGTTCAGAACTCATCATCAGTCGCTACATCTGGCAGCTACGAATTTCAAGAAACCGCGAGCAGTAATAGTCAGACTTTGACATTGTCAATGGGTAGTGGCAAAGTTTCAGCAAGTGAAACCAGTGGTGATAAGAGTACAATCGTAAGCATAGTTGAACCCACACCAAAACGGACTTCGGATACCTTCGGCCAAAGGACATCTATATATCGTGGTGTAACAAGACATAGATGGACTGGTAGGTATGAGGCTCACCTTTGGGACAATAGCTGTAGGAGAGAAGGGCAATCAAGAAAAGGGCGACAAGTATTAATTGCTATTATAACTATTGTGGAAGGTGGCTATGACAAGGAGGACAAAGCAGCTAGGGCTTATGATCTTGCTGCTCTAAAGTATTGGGGGCCATCAACTACTACAAACTTTCCAGTAAATAACTATGAGAAGGAATTGGAGGAAATGAAGCATATGACTAGACAAGAATTTGTGGCCGCCATCAGAAGGAAGAGCAGTGGTTTTTCTAGGGGTGCTTCTATGTATCGTGGAGTGACAAGGCATCACCAACATGGAAGATGGCAAGCACGGATTGGCAGAGTTGCAGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAAGAAGAAGCTGCAGAAGCTTATGACGTAGCTGCAATTAAATTTAGAGGCTTAAGCGCTGTGACTAACTTTGACATGAATCGTTATGATGTTAAGAGCATCCTTGAAAGTAACACTCTCCCAATCGGAGGAGGGGCAGCTAAGCGGCTAAAGGAGGCTCAAGCCCTCGAATCTTCTAGGAAACGTGAAGAGATAATTGCCCTAGGTTCAAGCTTCTCCTATGGAAGCTCAAGCTCTAGCAGACTACAAGGATATTCTCTAATGCAACATCATTTTGATCAGCCTCAGCCTTTGCTTAGCCTACACAGTCAGGATATTACACCATATTCGCATGATCCTTCATTTCATCACAGTAACTACATTCAAGCCCATCTGCAACTGCACCAGCAAAGTTCAGGTTCTAATTATCTACAACACCACCCATCGCACAATGCACAACTTTACAACAACTTTCTTCAGGCTAATCCAGCTTTGGTTCAAGGGTTAATGAACATGGGATCCTCCCCTTCATTGATTGAGAGCTCTAGTGGGAGTACTTATAATACTGATGGATTTTTGGGAAACAGCCTTGGGATAACATCTAATTCCACAGTTGGTACAGGCAACGTTGGGGAACTTGCTATGGTTAAGGTTGACTATGATGACATGCCGGCTGGAAATTATGGAGGCTGGTCCGGTGACTCCGTCCAAGGGTCAAGTGCTGGTGGAGTTTTCACAATGTGGAATGAGTAG 1509 0.4394 MNIPADSEVPKVADFLGVSKSEHRSDLVAFDEIQPSDSGYLFSNTSMIPVQNSSSVATSGSYEFQETASSNSQTLTLSMGSGKVSASETSGDKSTIVSIVEPTPKRTSDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVLIAIITIVEGGYDKEDKAARAYDLAALKYWGPSTTTNFPVNNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDVAAIKFRGLSAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQALESSRKREEIIALGSSFSYGSSSSSRLQGYSLMQHHFDQPQPLLSLHSQDITPYSHDPSFHHSNYIQAHLQLHQQSSGSNYLQHHPSHNAQLYNNFLQANPALVQGLMNMGSSPSLIESSSGSTYNTDGFLGNSLGITSNSTVGTGNVGELAMVKVDYDDMPAGNYGGWSGDSVQGSSAGGVFTMWNE* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00785 502 Pfam AP2 domain 117 182 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 Pfam AP2 domain 227 276 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 ProSiteProfiles AP2/ERF domain profile. 117 190 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 CDD AP2 225 284 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 SUPERFAMILY DNA-binding domain 116 192 IPR016177 GO:0003677
Pte17g00785 502 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 38 378 - -
Pte17g00785 502 FunFam AP2-like ethylene-responsive transcription factor ANT 116 192 - -
Pte17g00785 502 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 PRINTS Ethylene responsive element binding protein signature 266 286 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 SMART rav1_2 226 290 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 SMART rav1_2 117 196 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 ProSiteProfiles AP2/ERF domain profile. 226 284 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 Gene3D AP2/ERF domain 226 286 IPR036955 GO:0003700|GO:0006355
Pte17g00785 502 Gene3D AP2/ERF domain 117 192 IPR036955 GO:0003700|GO:0006355
Pte17g00785 502 FunFam AP2-like ethylene-responsive transcription factor 225 286 - -
Pte17g00785 502 CDD AP2 116 192 IPR001471 GO:0003700|GO:0006355
Pte17g00785 502 SUPERFAMILY DNA-binding domain 225 285 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00785 Pte-Chr17 22373526 22376104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00785 9 503 AP2-EREBP Transcription Factor Family AT3G20840 62.684 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte17g00785 AP2 1.5e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00785 K09285 - pvy:116115844 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00785 17 22373526 22376104 Pte17g00785 17 22373526 22376104 RCT