Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00783 ATGGAGTCAGATCTTCAACCCCAGCCCCACATGAATTCTGGGTTGACGCGTTACCGTTCAGCGCCAAGTTCATATTTTACAGATATTCTTGATGGAGAGTTCTGCGATCAATTTTTCAATCGCCCTTCAAGCCCTGAAACAGAGAGAATATTTGCACGCTTTATGAACAGTGGCATCGGCGGTGCTTCTAACGAAGATGATTCCTTTACTCAAACCGTTTCGCCTGTACAAATTTCTGTGGTGAAAGAAGAGATTGGTGAGCAGAGTCAAGCGTCGCCATCTTTGAATCGCGAGGCAGTACCTCGTCAGCAGCAGCAACAACAGTGCAATATCAACAGCTATGCCTCTGCTCCACAAAACTTTTACAAGAGTTCATCTAAACCACCTTTGCCGAATCAGAGTCATACTTCAGGCATGGAAGCAAATTATTCAATAGGGATAGGTCGTTTGCCAGCAATGAAGACTGGGGGTGTTGGTAACTCGACTCTTATCAGACATAGTAGTTCGCCAGCCGGGTTATTCTCCCATATAAACTTTGACACCAGCTCTGTTGGTATAGGAGGCACGGCAAATGTCAGAGCTGGTAATGCCGATAATGAAGAAGCCTCTTTTTCTCCTTCAAGCAGGTTGAAAAATTCAATGAACTACGCATCGGGTTTCATGTCACCAACAGCTGAAATTGGTGGTGTCAAAGGCAATGAAATTAATAGTATGACTGGTGAAGGTTTTGCAGAAAGCAGAGTTAACAATTATATTGACGCTGGTTTCTCCGCTGGTTCTTGGGATGATTCTGCGATCATGTCTGATAACATTGGTGGAGTGAAAAGATTTAGAGATGATGAAGGAACATCACTATCCGGGTTAAACGAAGTAGCTGAGACGATTCAGAATGATGCTGTCAGCCGACCTCGTCCTTTGGCTCATCACTTGAGTTTGCCAAGAACTTCATCAGAAATGGCAGAGATGGAAACATATTTGCAGCTATCAGACTCTGTACCATGCAAGATTCGTGCCAAGCGGGGTTGTGCCACTCATCCCAGAAGTATTGCTGAGAGGGTGAGAAGAACGAAAATTAGTGAGCGTATGAGGAAACTACAAGATCTTGTTCCCAGCATGGACAAGCAAACAAATACCGCAGACATGCTAGACCTTGCTGTAGATTACATCAAAGATCTTCAAAAACAGGTTCAGAAACTTACAGATGCTCGAGTTAAATGTACGTGCATGAACCAGCAGCAGCAGCAGCTTTAA 1251 0.442 MESDLQPQPHMNSGLTRYRSAPSSYFTDILDGEFCDQFFNRPSSPETERIFARFMNSGIGGASNEDDSFTQTVSPVQISVVKEEIGEQSQASPSLNREAVPRQQQQQQCNINSYASAPQNFYKSSSKPPLPNQSHTSGMEANYSIGIGRLPAMKTGGVGNSTLIRHSSSPAGLFSHINFDTSSVGIGGTANVRAGNADNEEASFSPSSRLKNSMNYASGFMSPTAEIGGVKGNEINSMTGEGFAESRVNNYIDAGFSAGSWDDSAIMSDNIGGVKRFRDDEGTSLSGLNEVAETIQNDAVSRPRPLAHHLSLPRTSSEMAEMETYLQLSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPSMDKQTNTADMLDLAVDYIKDLQKQVQKLTDARVKCTCMNQQQQQL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00783 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 342 392 IPR011598 GO:0046983
Pte17g00783 416 Gene3D - 343 416 IPR036638 GO:0046983
Pte17g00783 416 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 124 412 - -
Pte17g00783 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 409 IPR036638 GO:0046983
Pte17g00783 416 FunFam Transcription factor bHLH130 family 343 412 - -
Pte17g00783 416 SMART finulus 348 398 IPR011598 GO:0046983
Pte17g00783 416 MobiDBLite consensus disorder prediction 85 139 - -
Pte17g00783 416 Pfam Helix-loop-helix DNA-binding domain 347 393 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00783 Pte-Chr17 22333590 22337393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00783 4 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.173 8.96e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte17g00783 HLH 7.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00783 - - qsa:O6P43_028130 496.123