Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00771 ATGTCGAACGGTAGCTTTGGTGTTGCACCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAATATAGTTCTTGCGGTGAGTGTTCCATGCAGCAGCCTGTTTGACATTGTGACCGTGCGATGTGGACACTGCACCAATCTGTGGTCCGTGAATATGGCCGCTGCTTTTCAGTCAATGTCACGGCAAGATGTTCAGGCTGTAGGCTACACCTCTCCAGAATATAGGGTTCACACAGCATCCTCCTCGAAAGGCAATAAGATAGCAATGCATTCAGCAACCAACACAAACGTGACTGAAGAGAGGGCGGTGAATCGACGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATACAACCAGTTCATCAAAGAGGAGATCCAGAGGATAAAGGCAAGTAATCCTGATATTAGCCACAGGGAAGCCTTCAGCACTGCTGCGAAAAATTGGGCACATTTTCCCAGTATTCATTTTGGACTAATGTTGGAGACGAACAATCAAGTGAAGCTGGATAAAGGCTCTGAGAAGCATGTGATGCCGAGAGGGCTGCGCTACTGA 558 0.4839 MSNGSFGVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSMSRQDVQAVGYTSPEYRVHTASSSKGNKIAMHSATNTNVTEERAVNRRPPEKRQRVPSAYNQFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPSIHFGLMLETNNQVKLDKGSEKHVMPRGLRY* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00771 185 CDD HMG-box_SF 114 150 - -
Pte17g00771 185 FunFam axial regulator YABBY 5-like 98 156 - -
Pte17g00771 185 PANTHER PROTEIN YABBY 6-RELATED 9 169 IPR006780 GO:0007275
Pte17g00771 185 SUPERFAMILY HMG-box 103 153 IPR036910 -
Pte17g00771 185 Pfam YABBY protein 9 160 IPR006780 GO:0007275
Pte17g00771 185 Gene3D High mobility group box domain 96 155 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00771 Pte-Chr17 21883118 21886772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00771 8 170 C2C2-YABBY Transcription Factor Family AT2G26580 76.074 4.98e-87 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte17g00771 YABBY 5e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00771 K25796 - gmx:100499942 296.975