Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00744 ATGTCTAACCAAACAAGGATGGGAGCTTCCAAATTCACAGAAGACGAGATCAATGATCTTGTGTCGAGGTTACAAGGATTGCTGCCCCAGCTGAATCAAAGGATTCACTCCAGGTTATCAGCATCACAAATTCTGAAAGAAACTTGTTCTCACATCAAGAGGTTACAAGAAGAGGTGGATGGCCTTTGTGAAAGACTATCTCGACTAATGGATTCTATGGACATTACACACGCAGATATAGAAGAAACCGTGAGACAACTTTTGCAGCAGTAG 273 0.4212 MSNQTRMGASKFTEDEINDLVSRLQGLLPQLNQRIHSRLSASQILKETCSHIKRLQEEVDGLCERLSRLMDSMDITHADIEETVRQLLQQ* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00744 90 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 55 IPR011598 GO:0046983
Pte17g00744 90 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 74 IPR036638 GO:0046983
Pte17g00744 90 Pfam Helix-loop-helix DNA-binding domain 15 56 IPR011598 GO:0046983
Pte17g00744 90 Gene3D - 13 87 IPR036638 GO:0046983
Pte17g00744 90 Coils Coil 52 72 - -
Pte17g00744 90 PANTHER DNA BINDING PROTEIN 7 90 IPR044172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00744 Pte-Chr17 21387819 21388417 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00744 8 91 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 50.588 8.21e-20 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte17g00744 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00744 - - qsa:O6P43_022826 103.99