Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00740 ATGGGTTCCGCAGATCCACAACAAGCTGCACTTAAACTTTTGAGGAAAGTCATCAGGGATGACATGTCTAATACTCTGTGTGCTGCTGCAACACTCACTGCAGTCCCACCACGGCAATCAAACCATGGCTACCACCGCTGTTGCGGCCATTTTCTTCGTCCATTGACACTGTTAAATTCACATGCAATCAAAGTAGTTCATTTTGGTGCCATCTCGCACATCAGGAGGTTGCCTAGGATATCTGCTGCTGTTGCACAAGAAGAAGTGGCAGTGGCTGATGAGGCTGAAGCTAGTTTAGTAGAAGAGAATGAGCCGGTAGAAGAGGATCGAGATCGACAAAACCAACGACATAAGGCTACAGTGCAAATTCACCTCCAGTGTATAGCTCCAGGTGAATTTAGCCACACGTTAGCTTACGCAAGTCCAGCAGCACCAGCAAAGGCATACAAGGCAAAAGGTAAACCTAGGCGGCCTCGTTGTCCAACTTCACGATCTGAAAATTCGATATTGGCAAGCCCAAATGTCAAAGCCTTCACGTTTAGCGAGCTAGCAAATGCAACTGCAAACTTCCATTCTGATAATTTACTTGGAGAAGGAGGATTTGGCGATGTGTATAAAGGTTGCATTGATGGACAAACTCTTGGTGTAGGAAGCCAAGTTGAAAAAATGGTAGTAGCTGTAAAGAAACTAAAACCTAAAGGATTTCAGGGGCACAAAGAATGGCTGTCTGAAGTCAATTTTCTTAGTCAGCTCCGTCATCCAAATCTTGTCAAACTTTTTGGATTCTGCTTGGATAAGGATAGCCGGCTTCTGGTTTATGAGTACATGCAAAAAGGCTCCCTGGATAAGCATTTGTATAAAAGAGGTGTTACAACACTTCCTTGGGCAATAAGGATGAAGGTTGCCATTGGTGCTGCTCGGTGCCTCACCTTCTTGCATGAATCAGAACAACAGATTATTTACCGTGATTTGAAGACTTCTAATATCTTATTAGATTCGGATTTCAATGCAAAACTTTCAGACTTTGGTCTGGCAAAGGCAGGACCTACTGGGGACCATTCTCATGTTTCAACTCGAGTCTTCGGTACACAAGGCTATGCAGCTCCGGAGTATCTCTCTACAGGTTGGTTAACTGCGAGATGTGACGTTTACAGCTTTGGGATTGTGCTACTGGAACTTCTTTCAGGACGTCATGCTTTCGATAAAACGAAAACTGGAGTAGAAAAGGACCTGGTAGATTGGGCAAGACCCTATCTAGGGGATAGGAGAAAAGTATTTAGAATCATGGATACCAAGTTAGAGGGGCAGTATCCGCAGAAAGCAGCCTATGCAGCGGCACTCCTTGCATTACGGTGTATAAGTGAGGCCAACGTCAGGCCACAGATGTCCGAGGTTTTAGCAATTTTGGAACAGCTTCCAATCACCACAAAACGTACTTCCAGTCCATCTCTAGCAGAGCAGACAATATCAGATTCGAGAGAAATTGCTAGTATAGGTGCATGA 1503 0.4464 MGSADPQQAALKLLRKVIRDDMSNTLCAAATLTAVPPRQSNHGYHRCCGHFLRPLTLLNSHAIKVVHFGAISHIRRLPRISAAVAQEEVAVADEAEASLVEENEPVEEDRDRQNQRHKATVQIHLQCIAPGEFSHTLAYASPAAPAKAYKAKGKPRRPRCPTSRSENSILASPNVKAFTFSELANATANFHSDNLLGEGGFGDVYKGCIDGQTLGVGSQVEKMVVAVKKLKPKGFQGHKEWLSEVNFLSQLRHPNLVKLFGFCLDKDSRLLVYEYMQKGSLDKHLYKRGVTTLPWAIRMKVAIGAARCLTFLHESEQQIIYRDLKTSNILLDSDFNAKLSDFGLAKAGPTGDHSHVSTRVFGTQGYAAPEYLSTGWLTARCDVYSFGIVLLELLSGRHAFDKTKTGVEKDLVDWARPYLGDRRKVFRIMDTKLEGQYPQKAAYAAALLALRCISEANVRPQMSEVLAILEQLPITTKRTSSPSLAEQTISDSREIASIGA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00740 500 FunFam Serine/threonine-protein kinase BIK1 159 275 - -
Pte17g00740 500 MobiDBLite consensus disorder prediction 95 116 - -
Pte17g00740 500 SMART serkin_6 190 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00740 500 PANTHER OS01G0588500 PROTEIN-RELATED 140 472 - -
Pte17g00740 500 ProSiteProfiles Protein kinase domain profile. 190 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00740 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Pte17g00740 500 Pfam Protein kinase domain 190 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00740 500 CDD STKc_IRAK 196 472 - -
Pte17g00740 500 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 276 483 - -
Pte17g00740 500 Gene3D Phosphorylase Kinase; domain 1 161 275 - -
Pte17g00740 500 Gene3D Transferase(Phosphotransferase) domain 1 276 493 - -
Pte17g00740 500 SUPERFAMILY Protein kinase-like (PK-like) 156 469 IPR011009 -
Pte17g00740 500 MobiDBLite consensus disorder prediction 148 167 - -
Pte17g00740 500 ProSitePatterns Protein kinases ATP-binding region signature. 196 229 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00740 Pte-Chr17 21298569 21302555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00740 152 469 Glycoside Hydrolase AT3G07070 47.720 1.06e-95 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte17g00740 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00740 - - qsa:O6P43_022821 496.893