Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00739 ATGGGAAAGTCACCTGGAAAATGGATCAAAACTGTTCTATTTGGGAAAAAGTCATCAAAATCCAACCCTACGAAAGGAAGAGAGAAATTTGGAACTGACAAGGAAGCATTGGACAGTAAGACATCCCAACCGAACTTGGTTCCAGATCTTCCTGTAGCTTCACATAAAATTGAGGCTCCGCTGAGCAACAATGAAACAGGGATAGAAGTGGGTAATAAAGAAAATGAAGATGTATTGTATGAGAGGGAAATATCTTTCCAAAGGAATCAGGGAACAGAGACAGAAGAATTAACCCCTGACGATGCACTTACTGACCAGGAGAAAATGATGCTGGAGCAAGCTGCAACCAAGGCACAGGCAGCTTTTCGGGGTTATTTGGCTCGACGGGCATTTTGGGCCCTTAAGGGCATTATAAGACTGCAGGCTCTTATCCGTGGGCACTTGGTGAGGAGACAAGCTGTTGCTACTTTATTCTGTATGTATGGGATCGTCAAGTTTCAGGCACTTGTTCGTGGAAGAAGCGTTAGGTGTTCAAATATTAGATTTATGAAATGTGATGCACCTAAGCCTCTGGATGACATGCTTGTCAAGCCAGGTGCTACTGATATATACACCAAAGTGATAAGGATGCCTGGAATTACCTTCATTCGCAAGCTTGTTGCATCACCACCAAAAGCTATGCCACTGCATCTCCAGTATGATCATGCTGAGCCAAACTCAGTCCCAAGTTGGTTGGAACGCTGGTCAATGTCTCACTTCTGGAAACCAGTTCCCCAGCCCAAGAAAGTTTCAGATTCTAAATCTCAGAAAAAGCCAAGTAATATTTCGATTGCGGAATCTCAAACAGGAAAGTCCAAGCGCAGTGTTAGGAAGCTTCCTGTTACAAACCTTGAGACTGTCTCAGCACAAACAACCTCTGAATTGGATAAACCAAAAAGAAGTGTGCGGAAATCTTCGAGCCAGATTACCCAGGTTATGGATTCCCCACAAGAAAATCCACAAATTGAACTTGAAAAGGTCAAGCGTAACCTAAGAAAGGTTCATAACCCAGTTGTGGAGAATGTTGTTCAGTCTGAAGTTGAAACTGACACTCTGGAACAAAGCATAGAAAAGCCACCTGTAACTTTGGGTCATGATGTTCTAAAGCAGGTTGCCGGTGATGCTAATGAGAATGTCGATAAAGGGGGAGCTAGCATGTTGTCCAACGTTCCTGATGTACTAGTAACTGTCGAACCCTTGGTGAGAAAAGATACATCTGATATACCACATAACAATCAAGGCTTGGTTGATTCAGGTCTTTCAGTGGATAGCATGAATAAAGATGAAAAACTTACTGGTGATCAAGCAATAGACGTAGCAAATTATTTGACTGATAGCAGCTCTAAACATGTGAACAATGTGATAGAAAATGGGGAATTAGGTCATAAGGAGAACAATGTAGGTAATGATGCGCAGAAGTCTGGCCGTAAATCTTCTACTCCTGCAAAGCTTGAACGAGCTGAGAGTGGTTCCCAGAATAGTCCGAGTTTACCCAGCTATATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGAGCCCAAGGCTCCCCAGGGTTCGGGCAAGAAAGTTCTGAGAGAAACAACAGCACCAGACGCCATTCTCTGCCTTCAGCTAACGGCAAAATAAGTTCTCATTCACCAAGGACACAGAGACCAGTACAAGCAGGCAGCAAAGGAGGGAGCAAAACCGACAGATCTTCCAAAGACGCAAATGGAAGGGCAACTCAAGTCGAGTGGAAAAGGTGA 1785 0.4381 MGKSPGKWIKTVLFGKKSSKSNPTKGREKFGTDKEALDSKTSQPNLVPDLPVASHKIEAPLSNNETGIEVGNKENEDVLYEREISFQRNQGTETEELTPDDALTDQEKMMLEQAATKAQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFCMYGIVKFQALVRGRSVRCSNIRFMKCDAPKPLDDMLVKPGATDIYTKVIRMPGITFIRKLVASPPKAMPLHLQYDHAEPNSVPSWLERWSMSHFWKPVPQPKKVSDSKSQKKPSNISIAESQTGKSKRSVRKLPVTNLETVSAQTTSELDKPKRSVRKSSSQITQVMDSPQENPQIELEKVKRNLRKVHNPVVENVVQSEVETDTLEQSIEKPPVTLGHDVLKQVAGDANENVDKGGASMLSNVPDVLVTVEPLVRKDTSDIPHNNQGLVDSGLSVDSMNKDEKLTGDQAIDVANYLTDSSSKHVNNVIENGELGHKENNVGNDAQKSGRKSSTPAKLERAESGSQNSPSLPSYMAATESAKAKLRAQGSPGFGQESSERNNSTRRHSLPSANGKISSHSPRTQRPVQAGSKGGSKTDRSSKDANGRATQVEWKR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00739 594 MobiDBLite consensus disorder prediction 1 49 - -
Pte17g00739 594 MobiDBLite consensus disorder prediction 258 331 - -
Pte17g00739 594 MobiDBLite consensus disorder prediction 575 594 - -
Pte17g00739 594 MobiDBLite consensus disorder prediction 480 514 - -
Pte17g00739 594 Pfam Protein of unknown function (DUF4005) 498 573 IPR025064 -
Pte17g00739 594 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Pte17g00739 594 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Pte17g00739 594 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Pte17g00739 594 MobiDBLite consensus disorder prediction 21 36 - -
Pte17g00739 594 Gene3D - 110 157 - -
Pte17g00739 594 MobiDBLite consensus disorder prediction 317 331 - -
Pte17g00739 594 MobiDBLite consensus disorder prediction 269 308 - -
Pte17g00739 594 SMART iq_5 133 154 IPR000048 GO:0005515
Pte17g00739 594 SMART iq_5 110 132 IPR000048 GO:0005515
Pte17g00739 594 MobiDBLite consensus disorder prediction 530 574 - -
Pte17g00739 594 PANTHER IQ-DOMAIN 5-RELATED 1 556 - -
Pte17g00739 594 ProSiteProfiles IQ motif profile. 135 157 IPR000048 GO:0005515
Pte17g00739 594 MobiDBLite consensus disorder prediction 471 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00739 Pte-Chr17 21264630 21270351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00739 1 595 IQD Protein Family AT1G74690 42.788 5.30e-126 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00739 - - qsu:111988548 608.216