Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00725 ATGTGGAACCCTTTGTCTTGGGTCATGGAGGCTGCAGCTATTATGGCAATTGCGCTTGCTAATGGAGGAGGGAAGCCCCCTGACTGGCAAGACTTTGTTGGTATCATCACTCTGCTTTTCATCAACTCTACTATCAGTTTCATCGAAGAAAATAATGCTGGTAACGCAGCTGCTGCTCTCATGGCCCGCCTTGCTCCGAAAGCAAAGGTGGTTCTTCGAGACGGGAGGTGGACCGAACAAGATGCCGCTGTTCTCGTTCCTGGTGATATTATCAGTGTTAAACTGGGAGACATCATCCCAGCTGATGCACGTCTGCTTGAAGGGGATCCCTTGAAAATCGATCAGTCAGCGCTAACAGGTGAGTCCCTGCCAGTAACTAAGGGTCCTGGTGACGGTGTGTACTCTGGTTCCACCTGCAAACAAGGAGAGATTGAAGCTGTGGTCATTGCCACTGGGGTTCATACCTTCTTTGGAAAAGCTGCACACCTTGTTGATACCACGAATCAAGTGGGCCACTTTCAGAAGGTGTTGACAGCAATTGGGAACTTCTGCATATGTTCGATTGCTGTCGGAATGATTGTTGAGATCATTGTTATGTATCCAATCCAACGACGCAAGTATCGCCCTGGCATTGACAACCTTCTCGTACTTCTTATTGGAGGCATTCCAATTGCCATGCCTACTGTTCTTTCGGTAACAATGGCTATTGGTTCTCATAGGTTATCGCAGCAGGGAGCCATTACTAAGAGGATGACAGCCATTGAGGAAATGGCAGGAATGGATGTCTTGTGCAGTGATAAGACAGGGACCCTTACATTAAACAAGCTAACTGTTGACAAAAATCTTATTGAGGTCTTTGCAAAAGGAGTGGATGCAGATAGTGTTGTTCTAATGGCAGCTCGAGCATCAAGAACAGAGAATCAAGATGCTATAGATGCTGCTATAGTTGGAATGTTGGCTGACCCAAAGGAGGCAAGAGCTGGAATCCAAGAAGTACATTTCCTCCCCTTCAACCCGACTGACAAGCGAACAGCACTGACATATATCGATCGTGATGGAAAAATGCACCGGGTTAGCAAAGGTGCACCAGAGCAGATCCTAAACCTTGCACACAACAAATCACACATAGAGCGTAGAGTTCATGCCGTGATTGATAAGTTTGCAGAGAGAGGGTTGAGATCTCTGGCCGTGGCATACCAGGAAGTGCCAGAAGGCACCAAAGAGAGTGCTGGAGCACCATGGCAGTTTACTGGTCTTATGCCTCTCTTTGATCCCCCAAGACATGACAGTGCAGATACAATAAGGAGGGCTTTGAATCTTGGAGTGAATGTGAAAATGATTACAGGGGATCAGCTAGCAATAGGGAAAGAAACAGGCCGTAGATTGGGAATGGGTACCAACATGTATCCTTCTTCTGCCTTGCTTGGGCAGGACAAGGATGAGTCCATTGCTGCCTTACCAGTTGACGAACTGATAGAAAAGGCTGATGGTTTTGCCGGAGTTTTTCCTGAGCACAAGTATGAGATTGTGAAACGCCTGCAAGCCAGGAAACATATTTGTGGAATGACTGGTGATGGAGTTAATGATGCTCCTGCTCTCAAAAAGGCCGACATTGGAATAGCTGTTGCTGATGCTACTGATGCAGCTCGAAGTGCTTCTGATATAGTCCTTACAGAACCTGGGCTTAGTGTAATCATCAGTGCTGTTTTGACCAGTCGAGCCATTTTTCAGAGGATGAAAAACTACACTATTTATGCCGTCTCCATTACAATTCGTATTGTGTTAGGGTTCATGTTATTGGCCCTCATATGGAAATTTGATTTTCCACCTTTCATGGTGCTAATTATAGCCATCCTGAATGATGGTACTATCATGACAATATCAAAAGATAGAGTGAAACCATCACCTCTACCAGATAGCTGGAAGCTTGCAGAAATTTTCACAACCGGTATTATTCTTGGAAGTTATCTAGCAATGATGACCGTCATTTTCTTTTGGGCAGCATATAAAACTGATTTCTTCCCGCGCATATTTGGAGTACCAACTCTTGAGAAAACTGCACATGATGATGTCCGCAAACTTGCCTCAGCAGTATATCTCCAAGTGAGCATTATTAGTCAAGCACTTATATTTGTGACACGTTCCCGAGGCTGGTCTTATGTGGAGCGTCCTGGTTTACTGCTTGTAGCAGCTTTTGTGATTGCTCAGCTTGTTGCCACCTTGATAGCTGTATATGCAAATTGGAGCTTTGCTGCTATTGAAGGAATTGGCTGGGGTTGGGCTGGTGTTATTTGGCTATATAACCTTATATTCTACATCCCACTTGACTTCATCAAGTTTTTCATTCGCTATGCTCTGAGTGGAAGGGCTTGGGATCTTGTCATCGAACAAAGGATTGCATTCACAAGACAAAAGGACTTTGGCAAGGAACAACGTGAGCTTCAATGGGCACATGCACAGAGAACATTGCATGGTTTACAACCCCCTGATGCGAAGCTTTTCCCTGAGCGAACACATTTTAATGAACTCAATCAAATTGCAGAGGAAGCCAGAAGGAGAGCTGAGATAGCAAGATTGAGAGAACTGCACACTCTGAAGGGCCATGTAGAAAATGTTGTGAGATTGAAGGGTCTCGACATCGATACAATTCAGCAATCATACACAGTTTGA 2670 0.4509 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENNAGNAAAALMARLAPKAKVVLRDGRWTEQDAAVLVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQRRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADSVVLMAARASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLAHNKSHIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGAPWQFTGLMPLFDPPRHDSADTIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIILGSYLAMMTVIFFWAAYKTDFFPRIFGVPTLEKTAHDDVRKLASAVYLQVSIISQALIFVTRSRGWSYVERPGLLLVAAFVIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNLIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDAKLFPERTHFNELNQIAEEARRRAEIARLRELHTLKGHVENVVRLKGLDIDTIQQSYTV* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00725 889 NCBIfam plasma-membrane proton-efflux P-type ATPase 1 745 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte17g00725 889 PANTHER CALCIUM-TRANSPORTING ATPASE 1 822 - -
Pte17g00725 889 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 786 IPR023298 -
Pte17g00725 889 FunFam Plasma membrane ATPase 415 571 - -
Pte17g00725 889 SFLD p-type atpase 246 574 IPR044492 -
Pte17g00725 889 SUPERFAMILY HAD-like 260 570 IPR036412 -
Pte17g00725 889 Gene3D - 28 754 - -
Pte17g00725 889 SUPERFAMILY Calcium ATPase, transduction domain A 67 164 IPR008250 -
Pte17g00725 889 PRINTS H+-transporting ATPase (proton pump) signature 699 720 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 PRINTS H+-transporting ATPase (proton pump) signature 380 398 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 PRINTS H+-transporting ATPase (proton pump) signature 554 579 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 PRINTS H+-transporting ATPase (proton pump) signature 495 511 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 PRINTS H+-transporting ATPase (proton pump) signature 523 539 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 Gene3D - 261 560 IPR023214 -
Pte17g00725 889 Pfam haloacid dehalogenase-like hydrolase 260 537 - -
Pte17g00725 889 SFLD C1.7: P-type atpase like 246 574 - -
Pte17g00725 889 FunFam Plasma membrane ATPase 276 423 - -
Pte17g00725 889 PRINTS P-type cation-transporting ATPase superfamily signature 264 278 - -
Pte17g00725 889 PRINTS P-type cation-transporting ATPase superfamily signature 440 450 - -
Pte17g00725 889 PRINTS P-type cation-transporting ATPase superfamily signature 546 558 - -
Pte17g00725 889 PRINTS P-type cation-transporting ATPase superfamily signature 418 429 - -
Pte17g00725 889 PRINTS P-type cation-transporting ATPase superfamily signature 523 542 - -
Pte17g00725 889 PRINTS P-type cation-transporting ATPase superfamily signature 114 128 - -
Pte17g00725 889 CDD P-type_ATPase_H 1 780 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte17g00725 889 FunFam ATPase 4 plasma membrane-type 508 754 - -
Pte17g00725 889 Gene3D - 66 151 - -
Pte17g00725 889 Gene3D - 276 423 IPR023299 GO:0000166
Pte17g00725 889 Coils Coil 840 860 - -
Pte17g00725 889 Pfam E1-E2 ATPase 64 243 - -
Pte17g00725 889 NCBIfam HAD-IC family P-type ATPase 498 611 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 NCBIfam HAD-IC family P-type ATPase 35 283 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte17g00725 889 ProSitePatterns E1-E2 ATPases phosphorylation site. 266 272 IPR018303 -
Pte17g00725 889 FunFam Plasma membrane ATPase 66 151 - -
Pte17g00725 889 Gene3D - 838 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00725 Pte-Chr17 20841746 20848767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00725 1 890 Primary Pumps ATPases AT5G62670 93.371 0.0 1674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00725 K01535 - cpap:110819640 1635.16