Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00723 ATGGGGCATAAGAAGCGAAATCTTGCTCCGCGAAGCAAACAGTCTCCTCCGGCTGCTGGCCCTCAATCTACTGGCGACGGATTCGCCGATGGCGCTGCTCCTACTTTGGCGGAGTCCGACCTAAGGTTGATTGCGAATGCTTTTCCCAACCAAGTTAAGATCGAGCCGGATTTTCTATGGTCGGATGGTTCGGCTTACTCTACGATCAAGCTAGAATGTGAGCGAGCCCTAAATGCCCTTCGGCGTGGGAATCATACCAAGGCTTTGAGGTTAATGAAGGAGTCCTGTGCGAAGCATGAGAGTTCCGCTCACTCGGCCTTAATCTACCGTGTCCACGGTACTGTGTGTGTGAAGGTCGCGCAGATTATCGATGACCCTATTGCAAAGCAAAGACATCTGAGGAATGCCATTGAGTCGGTGAGGAAGGCAGTGGAATTGTCACCCAATTCGGTTGAGTTCGCGCATTTCTATGCTAATCTATTGTATGAGGCTGCCAATGACGCGAAGGAGTACGAGGAGGTTGTGCAGGAGTGTGAGAGGGCATTGTCAATTGAAAATCCGATTGATCCTGCTAAAGAGAGCTTGCAAGAAGAGAGTCAACAGAAGATATCAAGTGCCGAGGCCCGAATAGCTCATGTGCAGAATGAGCTGAGGCAGTTAATTCAGAAGTCTAATATTGCTTCTCTATCGACTTGGATGAAGAATTTGGGCAATGGGGAGGAGAAGTTTCGATTAATTCCAATAAGGAGGCCCACTGAGGATCCAATGGAAGTGAGATTATTACAAACTAGAAGACCAAATGAAATTAAGAAAGCAACTAAGACGCCAGAAGAACGGAGGAAAGAGATTGAAGTTCGAGTGGCTGCTGCGAGGTTGTTGCAGCAGAAGTCAGAGTCAAATCAACCTCAAAATGAGGGAGGGAGTACTGATAGGGGGACGGATTCATCTTCTGGCTCTGGTCAGAGAGTTGGTGACAGAAGGAGGTATGGAATGCGAAAAAATGGGTCCAATTTAGAAAGGAAAGATTGGGTATGGTCGTATTGGAATTCTATGAGTGTCGATATGAAGAAGGATTTGACTGGGGTGAGGGTTGCTGACCTTAAATCCCATTTTGGATCTTCTAAGGATACTTTTGCAAGTGAGGTTTTGTCAGAAGCGTTATCTTTTGCAGAGGCTAATAAAACGTGGAAATTCTGGGCTTGCTGTAGATGTAATCAGAAACATTCTGATAAGGAATCTCACGTGCATCATGTTATACAAGAACACATCGGAATGCTCTTGCCTAAGATGCAGAGGCTTGTACCTCAAAATATTGAAAATGAATGTGTTGAGATTCTGCTGAATCATTCTTTTAAGCCTCTCAATTTACCAGCAGCTATTAAAATGGTGGAAAATCAAGAGAAGAGAAAGGGATTTAAGTTTTCTGAAGATTCATATCCAGATCAACATAACAAGGAGTGTCGTGATTGCTTTAGAGATGCCTGGGATTCTCATCCTGAGAAAGGAAGCATGGGGCAGATTTCTGATAATTGTGCTATGCAGATTAATGAATACATTGAAATTCATGAGAGTGACTGTAGGGAGTGTCCCGAGGACCAATCATCCTTGGCAAATTTATTTGACAATGGCTGGCTAGTTTCTGATGATTCTGAGCGAGCAAAGCTTCTTGAGAAAATTCAGGGGACGTTTGAGGTGCTTATTCGACACAAAGTTTTTGCAGCTAGCCACCTTCACAAGGTTATACAACTGGCAATGGATGAGCTACAGACTCATCCTTCTGCTGCTCAGCTTCTAAATCACGATCTTGATCAATCACCTATGTGTATCTGTTTTCTGGAAGCTGAGCAACTTAAAAAAATTCACCAGTATCTACAGGAACTATCTCATGCTTGTGGTTTGGGTAGGTATTCTGAGAAAGGTAGCAGTCCCACAGAGGATTTAAACCTTACAAATCAAGGACCAGAAATCATGGAGAAGATTGTTCTCAGTGAAGATGCGTTGTTCCTTCTTTTAGATGAGGGCTTACCGTTAATAGGTTCTGGCATAGCTCAAGGAACTACTGCTAGTGAAGTTACTTCTGCAACTTCCTCCTTCAGAGGTTCATCTGGTTCTGATGCTATGTTATCCTGGATTTTTGTGGGTTCTTCTAGTGATGAACAATTGGCTTCATGGATGCGTGCAAAAGAAGATAAAATACATCGGGGAGTAGAAATTCTGCAGATGCTTGAGAAGGAATTTTATCACCTGCAAAGCCTTTGTGAGAAGAAATGTGAGCGAGTGAACTATGGGGAAGGATTACAGGCAGTAGAGGATCTATGTCTTGAAGAAGGTAAGAGAAGGGAAATGGTAACTGAATTTGCACATCGAAGTTTTGAGTCTGTCTTGAGAAAGAGAAGAGAAGAGCTCATTGAGAGTGAGAACGACATGTTGTATGTCCGCACTAGATTTGAGTTGGATGCTATATCAAATGTTTTACAAGAAGCTGAAGCCATGAACGTCAATCAATTTGGTTATGAGGAAGCTAATAGTGGTACGACCTCTCAGTTTTGTGACCTGGAATCTGGAGGAGAAGAAGATTGGAGAGCCAAAGATTATATGCATCAAATGGATATTAGTATCGGCACAGCAATTCAGAAACAGAAAGAGCACCTTTCTTTGGAGCTCTGCAAAATTGATGCACGAATACTGCGGAATATGAATGGGATGAAGCACTTGGAGCTGAAGCTTGAGCAAGTGTCCGCTTATGATTATCAGACAGTAATACTGCCTCTGTTGAAATCATTCTTGAGGACACGATTGGAGGATCTGGCTGAGAAAGATGCCACTCAAAAGTCGGATGCTGCTAGAGAAGCATTTTTAGTTGAACTTGCTCTTGACTCGAAGAAAGTTCTGAGAGGAGGAAATGGTAATCCAAGGCACATGCAGGAGAAATCAAAGGATAAGAAAAAGAATAGGGATCAGAAGAAAATAAGAGATTCAAAGGTGATAATAATCCATTCTGTATTTGAAGGACCAAATCTTTGCTCTGACAGCTTTCTAATGATTTCTCTCAGTTCACATCCAGCAGTGCCTACTGCCGAATGTCCAGATTCTACAACTAGTCAATTGGAAGAACTGGATGAAGAAAATAGAAGAAAAATTGAGCTAGAAGAGGAAGAAAAAAAGCTTGAAGAAACTTTGGAATTGCAAAGACGTATAGAAAATGAGGCCAAACAGAAGCACCTTGCCGAGCAACACAAGAAGTTCTCTCAAACACATTCAGATAATGGAGCAAATCTTCATGACGCTCTCTCTAGGCCTTCAGCTGATTGCTTGGAAGTCTGTGAGCCGTTAAAACCTTCTATAATGGTTGAGCAGCTGGTGGAGAATGGTTTCTCATACATTCAAGAACATGTTAATAACAACATCGCAAATGGCTCCACAATGTCAATGAAATGTGCTGTAGATTCAGTTAGTGAGAACATTCACCATACCAATTATTCAAGAGTTAAACAGGGCATGCCTAATGGAGGTGTTCAAGATGCTGGTCTTCTACTGGCTGATAGACGATCAGGTAAACGTAGTAGACGCCATAAGAGTACTTCCAAGTTGGTTGATGAAAAGTTCGAATTGGTTCCACCTGGAAATAAGAACAGTCTTTGCCAAAGAACACATGTTGATGGTCATCTACAAGAACAAGTTGTTGAAGAAAATGGAATGAAGACCTTGAGAGAATTGCAAGTGGAAGATGATGATGAGGAAAGGTTCCAAGCTGACATAAAAAGAGCTGTACGGCAAAGCCTTGACACATATCAAGCACACCAGAAGTTGCCATTGGTTACACGTCCACAAACACATCCAAGAACATCTGGAGAAGCAGGTGAAGTTGGTCTTTCTACAGAGCAAGACAAAGGGGAGGTTACAAATGAGGAAGATGTTTTAGGTATGGGGCTGAAGAATGAAGTAGGTGAATACAATTGTTTCCTTAATGTTATCATACAGTCTCTGTGGCATCTTCGACAATTCCGAAATGAGTTTCTTAGAAGATCAACAGCACAGCATGTTCATGTGGGGGATCCTTGTGTTGTCTGTGCCTTGTATGAAATATTTGCTGCTATGAGCAATGCATCCAAGGAATTGCGAAGAGAAGCAATTGCACCCACATCCCTGAGGATAGCTCTCAGCAACCTGTATCCAGATAGCAACTTCTTCCAAGAGGTTATGTGTGCTGACAACAACTTTGACGAGCTTCTAAATCTTGTAGAGATGAATCATCAATTAGCTTGTGATCCAGAGTCTGGTGGCTGTGGCACACTCAACTACATACATCACTTCCTTTCAAAACCACCTCGTGTCTTCACAACAGTTCTCGGTTGGCAGAATACATGTGAAAGTACTGAAGACATAACAGCAACACTAGCAGCCTTGAGCACAAAGATAGACATCAGCATTCTATACCGTGGTTTGGATCCAAAAAGCACTCACAATTTGGTTTCAGTGGTTTGCTATTATGGTCAACACTATCACTGCTTTGCCTACAGCCATGATAATGAAAGATGGGTCATGTATGATGATAAGACGGTCAGAGTAATTGGTGGGTGGGCTGAAGTTCTGACAATGTGCGAGAAAGGTCATCTGCAGCCCCAAGTTCTCTTCTTCGAGTCTGCAGAGTAG 4653 0.4266 MGHKKRNLAPRSKQSPPAAGPQSTGDGFADGAAPTLAESDLRLIANAFPNQVKIEPDFLWSDGSAYSTIKLECERALNALRRGNHTKALRLMKESCAKHESSAHSALIYRVHGTVCVKVAQIIDDPIAKQRHLRNAIESVRKAVELSPNSVEFAHFYANLLYEAANDAKEYEEVVQECERALSIENPIDPAKESLQEESQQKISSAEARIAHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRPTEDPMEVRLLQTRRPNEIKKATKTPEERRKEIEVRVAAARLLQQKSESNQPQNEGGSTDRGTDSSSGSGQRVGDRRRYGMRKNGSNLERKDWVWSYWNSMSVDMKKDLTGVRVADLKSHFGSSKDTFASEVLSEALSFAEANKTWKFWACCRCNQKHSDKESHVHHVIQEHIGMLLPKMQRLVPQNIENECVEILLNHSFKPLNLPAAIKMVENQEKRKGFKFSEDSYPDQHNKECRDCFRDAWDSHPEKGSMGQISDNCAMQINEYIEIHESDCRECPEDQSSLANLFDNGWLVSDDSERAKLLEKIQGTFEVLIRHKVFAASHLHKVIQLAMDELQTHPSAAQLLNHDLDQSPMCICFLEAEQLKKIHQYLQELSHACGLGRYSEKGSSPTEDLNLTNQGPEIMEKIVLSEDALFLLLDEGLPLIGSGIAQGTTASEVTSATSSFRGSSGSDAMLSWIFVGSSSDEQLASWMRAKEDKIHRGVEILQMLEKEFYHLQSLCEKKCERVNYGEGLQAVEDLCLEEGKRREMVTEFAHRSFESVLRKRREELIESENDMLYVRTRFELDAISNVLQEAEAMNVNQFGYEEANSGTTSQFCDLESGGEEDWRAKDYMHQMDISIGTAIQKQKEHLSLELCKIDARILRNMNGMKHLELKLEQVSAYDYQTVILPLLKSFLRTRLEDLAEKDATQKSDAAREAFLVELALDSKKVLRGGNGNPRHMQEKSKDKKKNRDQKKIRDSKVIIIHSVFEGPNLCSDSFLMISLSSHPAVPTAECPDSTTSQLEELDEENRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQHKKFSQTHSDNGANLHDALSRPSADCLEVCEPLKPSIMVEQLVENGFSYIQEHVNNNIANGSTMSMKCAVDSVSENIHHTNYSRVKQGMPNGGVQDAGLLLADRRSGKRSRRHKSTSKLVDEKFELVPPGNKNSLCQRTHVDGHLQEQVVEENGMKTLRELQVEDDDEERFQADIKRAVRQSLDTYQAHQKLPLVTRPQTHPRTSGEAGEVGLSTEQDKGEVTNEEDVLGMGLKNEVGEYNCFLNVIIQSLWHLRQFRNEFLRRSTAQHVHVGDPCVVCALYEIFAAMSNASKELRREAIAPTSLRIALSNLYPDSNFFQEVMCADNNFDELLNLVEMNHQLACDPESGGCGTLNYIHHFLSKPPRVFTTVLGWQNTCESTEDITATLAALSTKIDISILYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDNERWVMYDDKTVRVIGGWAEVLTMCEKGHLQPQVLFFESAE* 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00723 1550 MobiDBLite consensus disorder prediction 293 333 - -
Pte17g00723 1550 Gene3D Cysteine proteinases 1290 1427 - -
Pte17g00723 1550 SUPERFAMILY Cysteine proteinases 1309 1547 IPR038765 -
Pte17g00723 1550 Coils Coil 1032 1073 - -
Pte17g00723 1550 MobiDBLite consensus disorder prediction 262 281 - -
Pte17g00723 1550 CDD Peptidase_C19 1310 1547 - -
Pte17g00723 1550 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1406 1548 - -
Pte17g00723 1550 Pfam Ubiquitin carboxyl-terminal hydrolase 1318 1400 IPR001394 GO:0004843|GO:0016579
Pte17g00723 1550 Gene3D Tetratricopeptide repeat domain 46 223 IPR011990 GO:0005515
Pte17g00723 1550 MobiDBLite consensus disorder prediction 293 322 - -
Pte17g00723 1550 MobiDBLite consensus disorder prediction 1 31 - -
Pte17g00723 1550 MobiDBLite consensus disorder prediction 1275 1302 - -
Pte17g00723 1550 Gene3D Cysteine proteinases 1434 1550 - -
Pte17g00723 1550 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Pte17g00723 1550 Coils Coil 196 223 - -
Pte17g00723 1550 MobiDBLite consensus disorder prediction 963 989 - -
Pte17g00723 1550 Pfam Protein of unknown function (DUF629) 345 873 IPR006865 -
Pte17g00723 1550 Pfam Ubiquitin carboxyl-terminal hydrolase 1472 1532 IPR001394 GO:0004843|GO:0016579
Pte17g00723 1550 SUPERFAMILY TPR-like 71 187 IPR011990 GO:0005515
Pte17g00723 1550 Coils Coil 161 181 - -
Pte17g00723 1550 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1309 1549 IPR028889 -
Pte17g00723 1550 MobiDBLite consensus disorder prediction 972 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00723 Pte-Chr17 20785323 20793418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00723 1354 1547 C2H2 Transcription Factor Family AT3G47910 63.265 5.20e-76 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00723 - - qsa:O6P43_022788 1691.4