Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00709 ATGCATGCTGCTGTACAACCTGGTCGTCGATCTCCAAAACCAATGAATAGTGCAAGTTCAGCTTCACCATTAAAAGCTAGTTCAGATACTGTACAGAATAGCACTGCATATACCCCATCTCAAGTTAAAGGCAAAAAGAGGGAACGGGCAGATCTGGGTTCCGAACATGGGAAGAGAGAACGCACAATGAAGAAAGATGATGTGGACTCTGGTCCTTGTAGACAGGAAAGCATTTTAAAGGTAGAAATGGAAAAAATAATGGACAAGGGTGGGCTGATTGATTCTGAAGGGGTTGAAAAACTTCTGCAGCTCATGGTTCCTGATAAAAGTGAGAAGAAGTTAGATTTGGCTGAGCGGTCAATACTAGCTGGTGTTATTGCAGAAACAGATGCGCATGATTGTCTGAGTCAGTTTGTACAGCTCAAGGGTTTGCTTTTATTGGATGAGTGGCTCCAAGAAGTCCTTAAAGGGAAGATTGGTGATGTCTGTGGTCCAAAAGATTCTGATAAGTCTGTGGAGGAGTTTCTATTGGTTGTACTTAGAGCACTCGATAAATTGCCTGTTAATCTGAAGGCTCTGCAAATGTGCAACATCGGGAAATCTGTGAATCGCCTGCGTAGCCATAAGAATTTGGAAATCCAGAAAAAGGCAAGGGGTTTGGTGGATGCATGGAAAAAACGTGTGGAAGCTGAAATGAATATAACCGATACAAAATCTGGTTTGAACCAGGCCGTATCCTGGCCTGTTCGACCTCAGATACTTGAAGTCTCTCAGGGTGGGATTAGGCAGTCAGGGGGATCCTATGAAGTTGCACTCAAGAGCTCAATTCCCCAGCTTTCTGCATCCAAGCTTGTTTCAAGCAAGACTGTTCAGGGGGACAGTACAGCTAGGCAAGTATCTCCCCCTGTTACTTCTCCTGGTTCTTCAAAATCGTTGCCACCTTGCGGATCTGCGGATGCAAATGCTAAAGAAAGGCAGCCACACTGTCCTATTATGACAGGTGCCTCTGACCTTCCTCTGACAACGGTAAGAGATGAGAAATTTAGTGGGTCTAGTCAATCTTACAGCACTAGTCAGTCTTTTTCTGGTGAGCAGACTAAATCAGGAGGAATTCTAGGAAAAGAGGATGTTAGGAGTTCTGCTTCTGCTTCAATGACTTCTAATAAAACAACTGCTGGTGGTTCATCACGACATCGGAAGTCTAGTAATGGATTGCCTGTATCGAATTCGTCTTGCATGCCTAGAGAGACTGGAACAGGGAGAAATTCTTTGACTAACAAGAACACGGCATCTGATAAATTATCACTGTCTGGAGTGGTTTATGAAAAGGCACCTGGAGGAACTGTTGAGGGAAATAATAACAAGTTAATTGTCAAGATCCCAAATCATGGTCGAAATCTTACGCAGGATGCTAACAGTGGCTGTCCTGATGATCCTTCACTAATCAAAAGCAGAGCATCGTCTCCTGTGCTTGCAGAAAGGCCTAATCCATCTGATCAAAGCATAAAAGGAAACACAAGTGTTATGATTGGGACGAATGAGGTTGATAGATCTACAGTTGTTAATGAAAGCAACAGTCTCAAATTAAAAGATGGTTCTTTCAGTTCCATGAAAGCCTTAATTGAAAGTTGTGTGAAATACTCTGAAGCTGATGCATCTCTTTCAGATGTAGATGATGCTGGAATGAATCTACTTGCTAGTGTGGCTGCTGGAGAGATTTCAAAATCTTGTTTAGCTACACCAATAAGATCTCCAAGAAGAAACAGTCCAATAGTTGAAGAATCTACTGTAGGAGACAATACTGAAGCTAAATGTCCAATAGACGGGAGTCATGATCATAATCACCCAGGAGACAGTGATGAAAATAAACGTAGCATGTCAGATGAACTATGTCGTGATTTGGGACGCACCGATGTGGTTGGTAATTCTGCTAATTTAGTCTCTGAAGAGAAATCAAATGGAGAGAAAGACAAGCATTGTAGCAATCCTAGTCAAGGAGTCCAGCAAATGAAAGAGAACTGCTTAGTTAGAGAAGAGAGAGATGGTGAAAAAGCACCTGATGCTTCACTCCCAGTCTTGCATGGTGGTACCATGGATGAGGTCACAAGTGGAGGGCATGGCGAACAACTGTGCGAGACAAAAGTTATTGTAAATATTGAAAAGGGAATTAATGACGCAAAACCAATTTTAGGTTGTTCAGCCACAGCAATGGAGATGGATGCAACATTAGACACCGAAATAGAGGTTGATGTTAAGGAAAATACGTGTTCCTTTGATAGATTGAATAGTGATAGTCGGACTGATGTGAAGTCTCCCTCAGCACGGCAGTTCCAGTCTGCACAAGGAGAGGAGCTGGTGTCCTCTAATCCATGTCATGGGATGGGGAAGATTGGGGATAACTTTGAACTGAAAGTTGATAAGCCTGAGCATACGAAGATTTCTGTTGCCAATGCTAAAATTCAAAAACCAAAACCGGGAGAAAATACCATGGTATCAACAAATGGTAGAGTACTTAGGACTCGGGGTTCAGAAATTCCTGACCAAGGTGCTGAGTACATTGGGGATAATTTGGCGAACAAAGAGGCCGATGGCCAACAGGATGGCCAAATCTTGCACAGTGATTCACCTAAAAATCAATCAAAAGAATCCGAACAAGTAGTGGGTTCTAAAGAATCAAAGTTGACTGCAATGGAAGCTGAAGTAGCAGAAGAATGCTCTTCCACAACAGTAGATGCTTCTTCTAAGTCTGCTGATGCTGCAATGTCAGGTGAGGGTGGTAAAATAGAATTTGATTTAAATGAAGGTTTGGATGCAGATGATGGGAAATGTCTGGATATGAATAGCAATTCCACACCAGGATGTTCACCTCCAGTGCGATTGACCAGTCTTTCACCATTTACTGCAACTGTCGTCTCGAACACTGTTTGTGCTTCAATCACTGTCGCCGCTGCAGCTAAAGGACCCTTTTTCCCTCCTGAAGATCTGTTAAAGAATAAAGTAGAACTTGGTTGGAAAGGATCAGCTGCAACCAGCGCATTCCGTCCTGCAGAACCAAGAAAAGTTATGGAAATGTCTTTACAAGCCTCAAGCATGCCTCTTTTTGATGCGACACCTGGAAAGCAGAGTCGTCCTTTGTTGGATATTGATTTGAATATAGCTGATGAAAGAATGCTGGAGGACGTGTCTTCCCAATCTTTGACTCAGAAAGATGATTTTGTACCTCTCCCAAATGATGTTCATGAACCTGCTGATGATAAGGTGTTGA 3265 0.4273 MHAAVQPGRRSPKPMNSASSASPLKASSDTVQNSTAYTPSQVKGKKRERADLGSEHGKRERTMKKDDVDSGPCRQESILKVEMEKIMDKGGLIDSEGVEKLLQLMVPDKSEKKLDLAERSILAGVIAETDAHDCLSQFVQLKGLLLLDEWLQEVLKGKIGDVCGPKDSDKSVEEFLLVVLRALDKLPVNLKALQMCNIGKSVNRLRSHKNLEIQKKARGLVDAWKKRVEAEMNITDTKSGLNQAVSWPVRPQILEVSQGGIRQSGGSYEVALKSSIPQLSASKLVSSKTVQGDSTARQVSPPVTSPGSSKSLPPCGSADANAKERQPHCPIMTGASDLPLTTVRDEKFSGSSQSYSTSQSFSGEQTKSGGILGKEDVRSSASASMTSNKTTAGGSSRHRKSSNGLPVSNSSCMPRETGTGRNSLTNKNTASDKLSLSGVVYEKAPGGTVEGNNNKLIVKIPNHGRNLTQDANSGCPDDPSLIKSRASSPVLAERPNPSDQSIKGNTSVMIGTNEVDRSTVVNESNSLKLKDGSFSSMKALIESCVKYSEADASLSDVDDAGMNLLASVAAGEISKSCLATPIRSPRRNSPIVEESTVGDNTEAKCPIDGSHDHNHPGDSDENKRSMSDELCRDLGRTDVVGNSANLVSEEKSNGEKDKHCSNPSQGVQQMKENCLVREERDGEKAPDASLPVLHGGTMDEVTSGGHGEQLCETKVIVNIEKGINDAKPILGCSATAMEMDATLDTEIEVDVKENTCSFDRLNSDSRTDVKSPSARQFQSAQGEELVSSNPCHGMGKIGDNFELKVDKPEHTKISVANAKIQKPKPGENTMVSTNGRVLRTRGSEIPDQGAEYIGDNLANKEADGQQDGQILHSDSPKNQSKESEQVVGSKESKLTAMEAEVAEECSSTTVDASSKSADAAMSGEGGKIEFDLNEGLDADDGKCLDMNSNSTPGCSPPVRLTSLSPFTATVVSNTVCASITVAAAAKGPFFPPEDLLKNKVELGWKGSAATSAFRPAEPRKVMEMSLQASSMPLFDATPGKQSRPLLDIDLNIADERMLEDVSSQSLTQKDDFVPLPNDVHEPADDKVL 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00709 1088 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 238 IPR035441 -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 1 74 - -
Pte17g00709 1088 SMART TFS2_5 151 230 IPR003617 GO:0005634
Pte17g00709 1088 MobiDBLite consensus disorder prediction 491 505 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 345 367 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 864 892 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 486 505 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 581 626 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 767 786 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 864 885 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 1074 1088 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 605 626 - -
Pte17g00709 1088 ProSiteProfiles TFIIS N-terminal domain profile. 153 231 IPR017923 -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 379 430 - -
Pte17g00709 1088 Pfam TFIIS helical bundle-like domain 179 228 IPR017923 -
Pte17g00709 1088 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 97 232 IPR035441 -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 763 792 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 287 430 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 641 666 - -
Pte17g00709 1088 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 528 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 1060 1088 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 287 315 - -
Pte17g00709 1088 CDD TFIIS_I 165 229 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 12 41 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 821 850 - -
Pte17g00709 1088 MobiDBLite consensus disorder prediction 42 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00709 Pte-Chr17 20139445 20145001 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pte17g00709 Med26 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00709 - - cave:132173629 843.958