Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00676 ATGGGTCGCCATTCATGTTGTCTGAAGCAGAAGTTAAGGAAAGGATTATGGTCACCAGAAGAAGATGAGAAGCTATACAACTACCTGACCACATGTGGCGTAGGGTGTTGGAGTACAGTTCCTAAGCTAGCTGGATTGCAAAGATGTGGAAAAAGCTGCAGATTAAGATGGATAAACTACTTGAGGCCTGGTTTGAAGAGAGGAATGTTCTCACAGCGGGAGGAGGATCTTATTATCAGTCTCCACGAAGTTCTAGGCAATAGGTGGGCTCAAATTGCAGCACATTTACCTGGAAGAACTGACAATGAGGTCAAGAACTTTTGGAACTCGTGTCTGAAGAAGAAGTTAATGAAGCGAGGGATTGATCCGACCACGCACAAGGCACTCAGTGCAGAAGCTCAAGTGGAAAGTTCAGAAACACCATCTTCTCAGAGATTTTTGTCACAAGGAATTTCCAGTTCTACCTCCACCATTAACTCACAAGTATCATCATTTCTAGAAAAAAATTCAATTTATTACGATAATGGTCAAACAGAAAACTTCATGATGAGCAAGCACGAAGCCTATGATCCATTGTCATACTATGAGTTGCAAATGGACAGAGACCAAGCTGCATACAATTCAAATGTCAGTCATTCTGATCCTCATAATGATTTCACAACGAATCCAAGCTTTGGATCTGCCTCCATGCCAACTTTAACCAATCATGATCAAGGCAACATATCAGGGGCAGAGTTGAAGGAGAATCATTCAGCTTCCAGAATGAGTTCAGCTTTCTTAAATGATCAGGTGAAGGAAAATTCAAGCAATAGCTCAAACATAAGTACTTATCAAGCGACACAGATGACTAGCAATGCAAACTTTTCATGGGATGGAGAGAACAAAGTGGACCATTTGTTTGATTTCCAGGTCACTTCAATAGAATGCGAGGATTTCAATAGAGTTTCATGGGATGAAAGCCAACTTAAGATAGAGGCGTCAATGGATTTCAGTACCTATCCATTAACGTCTCTTTCAGAGGATATAACAGGAAGTTATTACAATGTGTTCTCGCAAATATAA 1062 0.4068 MGRHSCCLKQKLRKGLWSPEEDEKLYNYLTTCGVGCWSTVPKLAGLQRCGKSCRLRWINYLRPGLKRGMFSQREEDLIISLHEVLGNRWAQIAAHLPGRTDNEVKNFWNSCLKKKLMKRGIDPTTHKALSAEAQVESSETPSSQRFLSQGISSSTSTINSQVSSFLEKNSIYYDNGQTENFMMSKHEAYDPLSYYELQMDRDQAAYNSNVSHSDPHNDFTTNPSFGSASMPTLTNHDQGNISGAELKENHSASRMSSAFLNDQVKENSSNSSNISTYQATQMTSNANFSWDGENKVDHLFDFQVTSIECEDFNRVSWDESQLKIEASMDFSTYPLTSLSEDITGSYYNVFSQI* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00676 353 MobiDBLite consensus disorder prediction 207 241 - -
Pte17g00676 353 FunFam Transcription factor MYB86 69 138 - -
Pte17g00676 353 FunFam MYB transcription factor 11 67 - -
Pte17g00676 353 Gene3D - 69 141 - -
Pte17g00676 353 CDD SANT 70 109 IPR001005 -
Pte17g00676 353 Gene3D - 11 67 - -
Pte17g00676 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte17g00676 353 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte17g00676 353 CDD SANT 17 61 IPR001005 -
Pte17g00676 353 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte17g00676 353 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pte17g00676 353 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte17g00676 353 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pte17g00676 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte17g00676 353 SMART sant 66 114 IPR001005 -
Pte17g00676 353 SMART sant 13 63 IPR001005 -
Pte17g00676 353 PANTHER MYB DOMAIN PROTEIN 55 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00676 Pte-Chr17 17052459 17053789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00676 1 137 MYB Transcription Factor Family AT1G57560 76.642 1.82e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte17g00676 Myb_DNA-binding 4.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00676 K09422 - gmx:100811140 432.565