Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00657 ATGCGGCAGGATCAGTCCTCTGATTATGATCCCGACGATCCTAACTTTGAGTTCGTTGAGGTGGATCCTAGTGGTCGATATGGTCGGTACAAAGAAGTTCTAGGAAGGGGAGCATTCAAGAAAGTATACCGGGGATTTGATGAATTGGAAGGAATCGAAGTAGCATGGAATCAGGTTAAGGTTGCAGATCTTTTGAGGAACTCTGAAGATTTGGAGCGCCTGTATTCTGAAGTTCACTTGCTCAAGACATTAAAGCATAAGAACATAATTAAATTTTATAATTTGTGGGTTGACAAGAAAAATGAGAATATCAACTTCATCACTGAGATTTTTATGAAGAAACATAAGCATGTTGATTTAAGAGCCTTGAAGAAATGGTCTAGGCAGATCTTGGAGGGCCTTTCATATCTGCACAGCCATGATCCACCAGTTATTCATCGATATCTCAAATGTGACAACATTTTTGTAAATGGGAATCAAGGTGAAGTCAAAATTGGTGACTTGGGGCTGGCCGCCATTCTTTGCCAAGTCCGTTCAGCTCACAGTGTCATTGGCACTCCAGAGTTTATGGCTCCTGAGCTTTATAAAGAGGAATACAATGAGCTGGTTGATATCTACGCCTTTGGAATGTGCTTGCTGGAGTTGGTAACCTTTCAGTATCCATATGCTGAATGTACTAATGCTGCTCAGATATACAAGAAAGTGACTTCTGGAATAAAGCCTGCATCTCTGGAAAAAGTGGAGGATCCTCAAGTTAAGGTATTCATAGAGAAGTGTATAGCCAACGTCTCAGAGCGTTTGTCAGACCCCTTTCTCCAGTCCGAAACTGATCATGGTTTACTAGGTCGTCCTATGCAGCCGAACCATCAGTTGGGAGGTGCTAATGATAATAATGTTACTGGTAAAATTTGGAAGGATGATCTTGCCATGACTAGCAGAGATTTCACAGTACAAGGTCAGAGGAAAGATGTGAACACTATATATCTTAAACGGCGGATGGCAGACTCCTTAGGTAATTTCCGGAATATCCATTTCCCTTTTGATATTGAGAAGGACACTGCAATTGCTGTTGCGAGTGAAATGGTTCAGGAGTTAGACCTTACAGATCAAGATGTTACAGCCATTGCTGCAATGATTGACTCAGAAATCCAATCCCTTATTCCAGGTTGGAGTTCAAATGAAATTCATGGAGACGAGGAGGTCGATCAGTGCATTCATGATGATGTTAATGAGGAGAATGCTACCGACTTGACGGCAGCACAACCAATTCATGATTATCTAACCAGGAATCCTGGTGCAAATAAGGAAGGGAGAATTTCAGAAGATAATGCACAGGGAGGTGTAAAATCAGAGAATATCAGCATGATTGCCAGTAATCTGGAATATCTATTGGTTGGACAAGACAAAGAACTTAGTGAGCTTAGGAGGAAGCATAAATTGGAAGTTTTGGATCTTCTGAAGGAAATTGATTCTGAAACTCAAAACAAATATTATAAATACGTGCAAGCTGAATAA 1515 0.4079 MRQDQSSDYDPDDPNFEFVEVDPSGRYGRYKEVLGRGAFKKVYRGFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNLWVDKKNENINFITEIFMKKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRYLKCDNIFVNGNQGEVKIGDLGLAAILCQVRSAHSVIGTPEFMAPELYKEEYNELVDIYAFGMCLLELVTFQYPYAECTNAAQIYKKVTSGIKPASLEKVEDPQVKVFIEKCIANVSERLSDPFLQSETDHGLLGRPMQPNHQLGGANDNNVTGKIWKDDLAMTSRDFTVQGQRKDVNTIYLKRRMADSLGNFRNIHFPFDIEKDTAIAVASEMVQELDLTDQDVTAIAAMIDSEIQSLIPGWSSNEIHGDEEVDQCIHDDVNEENATDLTAAQPIHDYLTRNPGANKEGRISEDNAQGGVKSENISMIASNLEYLLVGQDKELSELRRKHKLEVLDLLKEIDSETQNKYYKYVQAE* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00657 504 Gene3D Phosphorylase Kinase; domain 1 13 109 - -
Pte17g00657 504 Pfam Protein kinase domain 31 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00657 504 SUPERFAMILY Protein kinase-like (PK-like) 22 261 IPR011009 -
Pte17g00657 504 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 341 383 IPR024678 GO:0004674|GO:0005524
Pte17g00657 504 Gene3D - 325 419 - -
Pte17g00657 504 CDD STKc_WNK 26 272 - -
Pte17g00657 504 ProSiteProfiles Protein kinase domain profile. 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00657 504 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 396 - -
Pte17g00657 504 FunFam Probable serine/threonine-protein kinase WNK1 12 109 - -
Pte17g00657 504 FunFam probable serine/threonine-protein kinase WNK9 107 277 - -
Pte17g00657 504 Gene3D Transferase(Phosphotransferase) domain 1 110 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00657 Pte-Chr17 14260972 14265661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00657 18 393 MAP Kinase Kinase Kinase AT3G22420 50.112 1.02e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte17g00657 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00657 K08867 - pop:7453804 625.165