Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00651 ATGTTTTATGCACAAGATGTTGGAAATATGGCAAGCTTTGAACCTCCAACAGCACCCTCACAGCATACTGGTTCCCTAATTGTAAAGGGAATAGCTCGAAATGGTTCACCCCCATGGCGTGATGATGACAAAGATGGGCATTACACATTTGAGCTTGGAGATAATTTAACTTCTCGCTATAAAATTCACAGCAAGATGGGTGAAGGTACTTTTGGTCAGGTTTTAGAGTGCTGGGACAGAGAACGAAAGGAAATGGTTGCAGTTAAGATTGTCCGCGGTTTAAAGAAGTACCGTGAAGCTGCTTTGATTGAAATCGAGGTCCTGCAACAGCTTGGGAAACATGATAAAGGTGGCCACCGTTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAATCATATCTGTATCGTTTTTGAGAAGCTTGGACCAAGTTTATATGATTTCCTTCGGAAAAACAATTATCGTTCATTTCCCATTGATCTTGTCCGTGAGATCGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTGAAGATGATCCATACAGATTTGAAACCTGAAAATATTCTATTGGTTTCGTCTAACTACCTTAAAGTTCCTGACTACAAGGGTTCATCCCGTTCTCCAAATTCATATTTTAAGAGAGTGCCAGAGTCAAGTGCCATTAAGGTAATAGATTTCGGGAGCACCACCTACGAGAGACAAGATCAAAACTACATTGTATCCACACGTCATTATCGGGCGCCTGAGGTCATTCTTGGTCTTGGTTGGAGTTATCCGTGTGATGTATGGAGTGTTGGTTGCATTTTGGTGGAGTTGTTTACGGGCGAGGCTTTGTTTCAGACTCACGAGAATCTGGAACATCTTGCTATGATGGAGAGAGTACTTGGCCCGGTTCCTCATCATATGTTGAAGAGAGTAGATCGTCATGCAGAAAAGTATGTTAGAAGGGGAAGGCTTGACTGGCCTGAAGGTGCAACATCGAGAGAGAGCATTAAAGCTGTAACAAAGCTTCCACGTCTGCAGAACCTAATTATGCAACACGTTGATCACTCTGCTGGTGATATTATCCAACTTCTGCAGGGTCTACTAAGATATGACCCTTCAGAGAGGCTCACGGCGAGGGAAGCATTAAGGCATTCCTTTTTCAAGAGACCGACTTTGGAGATGACTTATTAG 1185 0.4278 MFYAQDVGNMASFEPPTAPSQHTGSLIVKGIARNGSPPWRDDDKDGHYTFELGDNLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAVKIVRGLKKYREAALIEIEVLQQLGKHDKGGHRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLKMIHTDLKPENILLVSSNYLKVPDYKGSSRSPNSYFKRVPESSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELFTGEALFQTHENLEHLAMMERVLGPVPHHMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVTKLPRLQNLIMQHVDHSAGDIIQLLQGLLRYDPSERLTAREALRHSFFKRPTLEMTY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00651 394 Pfam Protein kinase domain 60 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00651 394 CDD PKc_CLK 47 385 - -
Pte17g00651 394 Gene3D Phosphorylase Kinase; domain 1 47 140 - -
Pte17g00651 394 SUPERFAMILY Protein kinase-like (PK-like) 47 388 IPR011009 -
Pte17g00651 394 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 30 389 - -
Pte17g00651 394 FunFam Serine/threonine-protein kinase AFC2 136 385 - -
Pte17g00651 394 Gene3D Transferase(Phosphotransferase) domain 1 114 385 - -
Pte17g00651 394 FunFam Serine/threonine-protein kinase AFC2 47 140 - -
Pte17g00651 394 SMART serkin_6 60 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00651 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Pte17g00651 394 ProSiteProfiles Protein kinase domain profile. 60 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00651 Pte-Chr17 13718625 13721848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00651 65 385 Core Cell Cycle Gene Families AT1G76540 25.826 6.43e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pte17g00651 Pkinase 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00651 K08287 - gmx:100804452 714.916