Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00619 ATGATCATTCAACAATTACAAGATCACAGAGTTGTACTTGTAAATCAGGATTCGTTCTATCGTACTTTGATAGAAGAGGAACTGAAGAACGTACATGAGTATAATTTTGATCATCCTGATGCTTTTGATACAGAACAACTTTTAGAGTGTATGGGAAAACTCAAATCTGGACAATCAGTCCAGGTTCCAGTATATGATTTTAAGACCCATCGCCGTTCTCCTGACAGTTTTAGACAGGTTAATGCTTCTGATGTAATCATTTTGGAGGGTATTCTAGTTTTTCATGACCAATGTGTACGAGATTTGATGAATATGAAAATTTTTGTTGATGCAGATACGGATGTCAGGCTTGCCCGCAGGATAAGTCGTGACACTGTTCACAGGGGTAGAGATATCGATTCTGTTTTGCAACAGTATGCCAAGTTTGTCAAGCCTGCCTTCGACGATTTCATTCTTCCATCGAAAAAGTATGCTGATGTTATTATACCTCGTGGAGGTGACAACCATGTCGCCGTTGATTTGATTGTGCAACATATACGCACAAAGCTTGGTCAACATAACCTTTGCAAGATATATGCAGGTCTCAACATTATTCCATCTACTTTTCAGATTAGAGGAATGCATACTTTGATTCGTGATAGGGAAACACCAAAGGATGACTTCGTTTTCTATTCCGATAGACTAATACGTCTGGTAGTAGAACACGGACTGGGCTACCTGCCATTTATAGAGAAGCAGGTTACGACTCCTACAGGATCATTCTACACTGGGGTTGAATTTTGCAAGAGACTATGTGGAGTGTCGATTATCCGAAGTGGTGAAAGCATGGAAAATGCGTTGCGTGCATGCTGCAAAGGAATCAAAATAGGGAAAATCCTCATCCATCGACATGGTGACAATGGGACTGAGGTGTTTTCCTTGTTTCAATCTTTGATACGATGCAGTTTCTCTATAAGACAAAAATCTCACTTGCTGGTTTTCATTTCTTGTTACAAGCTTATATACGAGAAGCTTCCTAAAGATATTTCAGAACGTCATGTTCTGCTTATGGATCCAGTTCTTGCCACAGGCAACACTGCAAATAAAGCAATCGAGTTACTCTTAAAGAAGGGAGTGCCTGAATCACACATAATATTTCTCAACCTCATCTCTGCCCCAGAGGGATTACATTCAGTCTGCAAACGTTTCCCACACCTCAAAATCGTCACTTCAGAGATTGATGTTGGATTAAACAATGGACTTCGTGTCAAACCAGGGATGGGCGAGTTTGGTGATCGTTATTTTGGCACCGATAGTTCTTGA 1302 0.4032 MIIQQLQDHRVVLVNQDSFYRTLIEEELKNVHEYNFDHPDAFDTEQLLECMGKLKSGQSVQVPVYDFKTHRRSPDSFRQVNASDVIILEGILVFHDQCVRDLMNMKIFVDADTDVRLARRISRDTVHRGRDIDSVLQQYAKFVKPAFDDFILPSKKYADVIIPRGGDNHVAVDLIVQHIRTKLGQHNLCKIYAGLNIIPSTFQIRGMHTLIRDRETPKDDFVFYSDRLIRLVVEHGLGYLPFIEKQVTTPTGSFYTGVEFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHRHGDNGTEVFSLFQSLIRCSFSIRQKSHLLVFISCYKLIYEKLPKDISERHVLLMDPVLATGNTANKAIELLLKKGVPESHIIFLNLISAPEGLHSVCKRFPHLKIVTSEIDVGLNNGLRVKPGMGEFGDRYFGTDSS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00619 433 CDD PRTases_typeI 262 403 IPR000836 -
Pte17g00619 433 Gene3D - 1 185 IPR027417 -
Pte17g00619 433 Pfam Phosphoribulokinase / Uridine kinase family 12 170 IPR006083 GO:0005524|GO:0016301
Pte17g00619 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 175 IPR027417 -
Pte17g00619 433 FunFam Uridine kinase 1 185 - -
Pte17g00619 433 Gene3D - 186 430 IPR029057 -
Pte17g00619 433 Pfam Uracil phosphoribosyltransferase 199 430 - -
Pte17g00619 433 CDD UMPK 1 182 IPR000764 -
Pte17g00619 433 SUPERFAMILY PRTase-like 197 429 IPR029057 -
Pte17g00619 433 PANTHER URIDINE KINASE 4 298 - -
Pte17g00619 433 PRINTS Uridine kinase signature 12 23 - -
Pte17g00619 433 PRINTS Uridine kinase signature 150 163 - -
Pte17g00619 433 PRINTS Uridine kinase signature 128 139 - -
Pte17g00619 433 PRINTS Uridine kinase signature 57 72 - -
Pte17g00619 433 PRINTS Uridine kinase signature 114 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00619 Pte-Chr17 10759775 10763130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00619 1 433 PRT Gene Family AT5G40870 76.443 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00619 K00876 - vvi:100257659 676.396