Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00618 ATGGCTATCACATTCTATGACGTTAACTCTGCTTCGGGGTTGAAGAAGCTCGATGACTACCTGCTTACTCGCAGTTACATAACTGGATATCAAGCGTCAAAGGATGATATCACAGTTTACTCAGCTTTGTTAAAAGCTCCATCAGCTGAATACGTCAACGTAAGCCGTTGGTACAAGCACATTGACTCACTGTTGAGGGTTTCTGGTGTTTCGGGAGAAGGATCTGGAGTCACTGTGGACGGCTCTGCTCCCGTTACAGAGGCAATTGCAACTCCACCAGCTGCAGACTCAAAGACAACAACAGCAGACGACGACGACGACGTGGATTTGTTTGGAGAAGAGACTGAGGAGGAAAAGAAGGCGGCCGAAGAACGCGCAGCTACCATCAAAGCATCTTCAAAGAAGAAGGAATCCGGGAAGTCATCTGTCCTTTTGGATATCAAGCCATGGGATGACGAAACAGACATGAAAAAGCTTGAAGAAGCCGTGAGAAGTGTCCAGATGGAAGGGTTGTTCTGGGGAGCATCGAAACTTGTACCTGTTGGATACGGTATCAAGAAACTGCAAATCATGCTAACCATAGTGGATGACTTGGTCTCGGTTGACAGTCTCATTGAGGAACAACTCACAGTTGAGCCAATAAATGAGTACGTCCAGAGTTGTGACATTGTTGCCTTCAACAAAATATAG 690 0.4623 MAITFYDVNSASGLKKLDDYLLTRSYITGYQASKDDITVYSALLKAPSAEYVNVSRWYKHIDSLLRVSGVSGEGSGVTVDGSAPVTEAIATPPAADSKTTTADDDDDVDLFGEETEEEKKAAEERAATIKASSKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVQMEGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEQLTVEPINEYVQSCDIVAFNKI* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00618 229 Pfam EF-1 guanine nucleotide exchange domain 142 229 IPR014038 GO:0003746|GO:0006414
Pte17g00618 229 Gene3D - 4 78 - -
Pte17g00618 229 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 104 112 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pte17g00618 229 SMART EF1_GNE_2 140 229 IPR014038 GO:0003746|GO:0006414
Pte17g00618 229 SUPERFAMILY eEF-1beta-like 137 229 IPR036219 -
Pte17g00618 229 SUPERFAMILY GST C-terminal domain-like 9 68 IPR036282 -
Pte17g00618 229 Coils Coil 112 132 - -
Pte17g00618 229 Gene3D - 133 229 IPR014717 -
Pte17g00618 229 FunFam Elongation factor 1-beta 1 like 134 229 - -
Pte17g00618 229 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 229 - -
Pte17g00618 229 FunFam Elongation factor 1-delta 1 3 78 - -
Pte17g00618 229 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 218 229 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pte17g00618 229 CDD EF1B 143 229 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00618 Pte-Chr17 10756762 10758932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00618 5 230 Eukaryotic Initiation Factors Gene Family AT2G18110 81.659 4.11e-122 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00618 K03232 - jre:108986587 343.584