Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00612 ATGTTAATTACTGAGTACCTAAGAGGGGGTGACCTCCATCAATACCTCAAGGAAAAAGGATCTCTTAGTCCTACAACAGCTGTCAACTTTGCATTGGACATTGCCAGAGGGATGGCCTGTCTTCACAATGAACCAAATGTTATCATTCACCGAGACCTTAAACCAAGGAATGTTCTTTTAGTCAATTCTAGTGCAGACCATCTGAAGGTTGGGGACTTTGGATTAAGTAAGCTGATCAAAGTCCAGAATTCTCATGATGTGTACAGAATGACTGGTGAAACTGGAAGTTATCGTTATATGGCCCCTGAAGTATTCAAGCATAGGAGATATGATAAGAAGGTCGATGTCTTCTCTTTTGCAATGATTTTGTACGAGATGATCGAAGGGGACCCACCATTTGCTAGTCATGAACCTTATGAAGCAGCCAAATATGTCGCAGATGGACACAGACCTATATTTCGTGCAAAGGGCTACACTGCAGAGCTGCGAGAATTAACAGAACAATGTTGGGATGCCGACATGAACCGAAGGCCTTCATTCTTGGAAATTCTCAAGCGACTTGAGAAGCTCAAGGATACTTTGCCCTCTGATCATCATTGGAATCTATTTCACTCATGA 618 0.4239 MLITEYLRGGDLHQYLKEKGSLSPTTAVNFALDIARGMACLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYRMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMIEGDPPFASHEPYEAAKYVADGHRPIFRAKGYTAELRELTEQCWDADMNRRPSFLEILKRLEKLKDTLPSDHHWNLFHS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00612 205 Pfam Protein tyrosine and serine/threonine kinase 1 187 IPR001245 GO:0004672|GO:0006468
Pte17g00612 205 Gene3D Transferase(Phosphotransferase) domain 1 1 195 - -
Pte17g00612 205 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00612 205 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 190 - -
Pte17g00612 205 SMART serkin_6 2 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00612 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Pte17g00612 205 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
Pte17g00612 205 FunFam Integrin-linked protein kinase family 8 203 - -
Pte17g00612 205 PRINTS Tyrosine kinase catalytic domain signature 158 180 IPR001245 GO:0004672|GO:0006468
Pte17g00612 205 PRINTS Tyrosine kinase catalytic domain signature 4 17 IPR001245 GO:0004672|GO:0006468
Pte17g00612 205 PRINTS Tyrosine kinase catalytic domain signature 42 60 IPR001245 GO:0004672|GO:0006468
Pte17g00612 205 PRINTS Tyrosine kinase catalytic domain signature 114 136 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00612 Pte-Chr17 10524681 10528044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00612 1 206 MAP Kinase Kinase Kinase AT1G14000 88.350 2.92e-136 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pte17g00612 PK_Tyr_Ser-Thr 9.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00612 - - csav:115700651 385.956