Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00611 ATGAGCTCCTCTGGCGCGTCCTCCGACGGTGATTCCGCTGGAAAGTCGGTGTCTGACAAAGGAAGCGCTAGTACTACTGATAAGGAGAAGCAGAAGGACAAAGCGAGGGTGAATAGGACGTCGTTAATACTATGGCATGCTCACCAGAATGACCCATCTGCAGTTCGGAAGCTTTTGGAAGAAGACCATTCGTTGGTTCTTGCTAGAGATTACGATAATCGAACGCCACTCCATGTGGCTTCTTTACATGGTTGGATCGACGTTGCCAAGTGCTTGATAGAATATGGTGCAGATGTCAACGCACAAGATCGGTGGAAAAACACTCCTCTAGCTGATGCAGAAGGAGCTGGGAAACACAGTATAATTGAGCTTTTGAAGTCACATGGCGGTTTGTCTTATGGCCAAAATGGAAGCCATTTTGAACCAAAGCCTGTCCCACCTCCACTTCCAAATAAGTGCGATTGGGAAATTGATCCTTCTGAACTTGACTTTTCAAATTCAGCTATTATTGGAAAGGGATCTTTTGGTGAGATTTTGAAGGCCAGTTGGCGTGGAACACCTGTGTTTGCTGTGAAACGCATTCTTCCCATCTCTTTCAGATGA 603 0.461 MSSSGASSDGDSAGKSVSDKGSASTTDKEKQKDKARVNRTSLILWHAHQNDPSAVRKLLEEDHSLVLARDYDNRTPLHVASLHGWIDVAKCLIEYGADVNAQDRWKNTPLADAEGAGKHSIIELLKSHGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNSAIIGKGSFGEILKASWRGTPVFAVKRILPISFR* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00611 200 PANTHER MYOTROPHIN 12 129 - -
Pte17g00611 200 MobiDBLite consensus disorder prediction 1 21 - -
Pte17g00611 200 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Pte17g00611 200 ProSitePatterns Protein kinases ATP-binding region signature. 170 192 IPR017441 GO:0005524
Pte17g00611 200 SMART ANK_2a 72 101 IPR002110 GO:0005515
Pte17g00611 200 Gene3D - 10 139 IPR036770 -
Pte17g00611 200 Gene3D Phosphorylase Kinase; domain 1 148 200 - -
Pte17g00611 200 Pfam Ankyrin repeats (3 copies) 37 103 IPR002110 GO:0005515
Pte17g00611 200 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Pte17g00611 200 MobiDBLite consensus disorder prediction 1 35 - -
Pte17g00611 200 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00611 Pte-Chr17 10519326 10521703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00611 2 196 MAP Kinase Kinase Kinase AT1G14000 76.923 1.34e-94 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00611 - - csv:101215575 317.39