Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00610 ATGGGATTTTTGTTGAAAGAAACTTTGAAGACCCTCTGCCGCTCAAACCAGTGGTCTTATGCTGTATTTTGGAAGATCGGGTGTCAGAACCCAAGGCTCTTGATCTGGGAAGAGTATCATTATGAACCCTCTCCCCACTCCAGCAGTCAATGCATAGCTGCTGTTGGGACATCTAGTTTTGCAGAAGGCCGAGTTTCTTCAGGGTCTCAGTCTACTCAACTTGGGGATCATGAAATGGATAGGGTTGCTAAATTGATTAACGAAATGATGATGAATAATCAGGTCAATTTAGTTGGTGAAGGAATGGTTGGGCGTGCTGCATTTACAGGAAAGCATCAATGGATTATCTTAAACAATTGCAGCAGAGATGCACATCCACCAGAGGGTTTGGCTGCGGTGCATCACCAATTTTCTGCGGGCATGCAGACAGTAGCTGCTATTCCGGTGCTTCCCCATGGGGTCGTACAATTCGGTTCATCCTATGAAATTATGGAGAGCTTTGGGTTCGTGAATGACGTGAAAAGATTAATATTGCAATTAGGATGCACACCAAAAGCTCTCCTATCTGAAAACTACACTACTAAAGCTACGGGTGTACCGGTGACTCATGGGGTGCCTCTATGTGCCAATTCCCAAGGAACCTCCACAGTGGCTAATATTTCTCCTGCAGCAAATGGCACGGTCAATCTACAGAATGAATTTAGTCATGTTTCATTACCTGGTCAATCATCTGATTATCTTCTAAAACCATTAAATAGTCAGAATTCTGAAGTAACCTATCAAGTTCCATATCTTTCTCACATGTTTTCCAACAGTGCTGATACTCTTAGCCAAGTAAAGGCCGTTCCAGTACTCAAACAGAACTTGGTAGGTCAGCAAGGAAGCAGGGTTGTGGGGGTTGAGGTGATTCCTTCAAATGGCGAAGCATGGTTTCAACAACAATCAGCTGCTTACAACTCAAGGTCTGGATTCAATACTGTAACTGATTTCGGAAATTTAAGTGTTACTGACTGTGATATGAAACCAAGGGCTCAGCAAATCCCTTTTGGTGAAGATAATGTTAATTCTAATGCAACCGCATCAAAATCCTCACTGATTTCTCAAATGAGAACGAATGGTGGCCCTTTACATGGTCACAACCAAGTTGCGGGACTAAACCAGGCGTTTGCCGGAATTAGCAATCATTCAAGTCAAAATCCAACTGTCAGCTCTATTTCAAACCTTTCTATATTGACTGGTATAAACAGTTCTAGTGCGCTTCAATCTGGAAGGACGCCAAAAGTTAAATCTGAGTCAGATGCTGTTGCTTTAAGTGCTATGCAAGGTCAATCACATACCGATGGTTTGTATCCTGAAGGCTCTATCCATGAGAATCGACGTGCTCAAAAAGGTTTGTCTCCAATAAAGACAAATGCTGATTCCCTTAGGACTCTTAACATGCCATCTTTTCCTTCTGAGGAGTGTGTCTCTGCGATTGAACATTCTGGTTTTACTCATGATGGGCAATGCATTGACATGATGACTGGAGATAGGGGAAAGATTCTTGCTAAACAAGAATCCTGTGCCCAGCCTTTATCTGGAAATGATCTATTTGATGTTCTTGGTGTGGACTTCAAAAATAAGTTGCTGAGTGGAAACTGGAATAATTTAGTTAGTACTGAGCCACATTTTGATGCAAATTCTTCAGGAAAGAGCAACCCTGCATTTGGTGATATGCAGGAAATAGGTCTTGATTGTTTTTCTGTTAATGGAGCAATATCAGATGGTGCTGTGTTTTCTGAAATGGGTTGTGACAACCTTCTAGATGCTGTGGTCTCAAAAGCTCAAACTAGTTTGAAGCGAATTTCTGATGATAATGTGTCTTGCAAGACCACATTGACCAGGAACAGTAGTTCCTCTCTTCCCAGTAGTTCTCTCACAAACAGGCAGGTCAATATGCATGATGATTTTCTCCAAGCGTTCTTAGCAAGTTGTGCTCAAACTAGTTCTCTAAATTCTGTATGTAGCAAAGATGATCGAGGAACCTGTTCCCAAACTACTTCCTTGTATGGGTCTCAACTTAGTTCTTGGGTGGAACGAGGCAGTAACTTGAAGGGGGAGAATAGTGTATCAACTGCATATTCAAAAAGGCCCGATGAAGTTTCCAAATCCAACCGGAAAAGACTTAAGCCTGGAGAGAACCCTCGACCCAGGCCCAAAGATCGTCAGATGATCCAAGATCGCGTGAAAGAATTGCGAGAAATTGTGCCTAATGGGGCCAAATGTAGCATAGATGCGCTCCTTGAACGCACCATTAAGCACATGCTTTTTTTGCAAAGCGTAACAAAGCATGCAGACAAACTCAAACAAACCGGAGAGTCCAAGATTATTGGAAAGGAAGGTGGACTCCTTCTGAGAGACAACTTTGAGGGAGGAGCTACTTGGGCGTATGAGGTTGGCTCACAATCTATGGTTTGTCCTATTATTGTTGAGGATTTGAATCAGCCAAGGCAGATGCTAGTGGAGATGCTTTGTGAAGAAAGGGGTTTCTTTTTGGAAATAGCTGACTTGATTAGAGGGTTGGGTTTGACCATCTTGAAAGGGGTTATGGAAGTTAAGAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAATAGGGACGTCACAAGGATGGAGATATTTATGTCACTGGTTCGTCTGTTGGAGCAAACTGTGAAAAATGGCGCATCTTCCTCAAATCCAATTGACAACAACATGATGGTTTATCACTCTTTTCCACAAGCTAGTTAG 2772 0.426 MGFLLKETLKTLCRSNQWSYAVFWKIGCQNPRLLIWEEYHYEPSPHSSSQCIAAVGTSSFAEGRVSSGSQSTQLGDHEMDRVAKLINEMMMNNQVNLVGEGMVGRAAFTGKHQWIILNNCSRDAHPPEGLAAVHHQFSAGMQTVAAIPVLPHGVVQFGSSYEIMESFGFVNDVKRLILQLGCTPKALLSENYTTKATGVPVTHGVPLCANSQGTSTVANISPAANGTVNLQNEFSHVSLPGQSSDYLLKPLNSQNSEVTYQVPYLSHMFSNSADTLSQVKAVPVLKQNLVGQQGSRVVGVEVIPSNGEAWFQQQSAAYNSRSGFNTVTDFGNLSVTDCDMKPRAQQIPFGEDNVNSNATASKSSLISQMRTNGGPLHGHNQVAGLNQAFAGISNHSSQNPTVSSISNLSILTGINSSSALQSGRTPKVKSESDAVALSAMQGQSHTDGLYPEGSIHENRRAQKGLSPIKTNADSLRTLNMPSFPSEECVSAIEHSGFTHDGQCIDMMTGDRGKILAKQESCAQPLSGNDLFDVLGVDFKNKLLSGNWNNLVSTEPHFDANSSGKSNPAFGDMQEIGLDCFSVNGAISDGAVFSEMGCDNLLDAVVSKAQTSLKRISDDNVSCKTTLTRNSSSSLPSSSLTNRQVNMHDDFLQAFLASCAQTSSLNSVCSKDDRGTCSQTTSLYGSQLSSWVERGSNLKGENSVSTAYSKRPDEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIIGKEGGLLLRDNFEGGATWAYEVGSQSMVCPIIVEDLNQPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEVKNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKNGASSSNPIDNNMMVYHSFPQAS* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00610 923 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 722 771 IPR011598 GO:0046983
Pte17g00610 923 MobiDBLite consensus disorder prediction 700 736 - -
Pte17g00610 923 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Pte17g00610 923 CDD bHLH_AtLHW_like 726 795 - -
Pte17g00610 923 MobiDBLite consensus disorder prediction 712 736 - -
Pte17g00610 923 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 921 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00610 Pte-Chr17 10386331 10391413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00610 509 910 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.798 5.51e-117 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00610 - - qsa:O6P43_028590 961.444