Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00609 ATGAAGATTAAGCTGGTCACATTTCTTTGCGGGTATCTCTCTTATCCAACCTTTAAACTGATGGAATTTCTGTGGAAAGAAACTTTGAAGAGACTCTGCGGTTCAAACCAGTGGTCTTATGCTGTATTTTGGAAGATCGGGTGTCAGAACCCACGGCTCTTGATCTGGGAAGATCATCATTATGAACCCTCACCTCGTTCCACCAGACATTGCATGGCTGCTGTTGGGACATCAAGTTTGGCAGAAGGCTGGGTTTCTGCAGGGTCTCATTCTACTCAGCTTGGGGATCATGAAGTGGATAGGGTAGCTAAATTGATTAACGAAATGATGATGAATAATCAGGTCAATTTCGTTGGTGAAGGAATGGTTGGACGTGCTGCATTTACAGGAAAGCATCAATGGATTGTTTTAAACGATTGCAGCAGAGATGCACATCCACCAGAGTTTTTAACTACGGTGCATCACCAAATTGCAGCGGGCATGCAGACACTAGCTGTTATTCCGGTGCTTCCCCATGGGGTCGTCCAATTCGGTTCATCCCATGAAATTATGGAGAACTTTAGGTTTGTGAATGACGTGAAAAGATTAATATTGCAATTAGGATGCACACCGAAAGCTCTTCTATCTGAAAACTACACTACTAAAGTTACTGGTGAAAATATGGGTGTACCGGTGACTCATGGGGTGCCTCTACATGCCAATTCCCAAGGAACCTCTACAGTGGCTAATTTTTCTTCTGCAGCAAATGGAATGGTCAATCTACAGAATGAATTTAGTCATATATCATTGCCACCTGGTCAATTGTCTGATTATCTTCTGAAAATTGTAAATAATCCTTCTATTGTGACTGGTATCAATGATGGGCAATGCAATGACATGATGAATGGAGATAGCGTAAACATGCTTGCTAAACAAGAATCCTGTGCCCAGCCTTTATCTGGAAATGATCTATTTGATGTTCTGGGTGTGGACTTGAAACATAAGTTACTGAGTGAAAATTGGAATGATTTGGTTAGTACTGATACACATTTTAATGCAAACACTTCAGGAAAGAACAACCCTACATTCGGTGATATGCAGGAAATAGGTCTCGATTGTTTTTCTGTTAACGAAGCAATATCAGATGGTGGTGTTTTCTCTGAAACGGGTAGTGACAACCTTCTAAATGCTGTGGTCTCAAAGGCTCAAACTAGTTTGAAGCGAATTTCTGATGATAATTTGTCTTGCAAGACCATGTTGACCAGGAGCAGTAGTTCCTCTCTTCCCAGTAGTTCCCTCACAAATAGGCAGGTCAATATGAATGATGATTTTCTCCAGGCATTAGCAAGGTCTGCTCAAACCAATTCTCTAAATTCTGTATGTAGCAAAGATGATCGAGGAATCTCTTCCCAAACTACTTCCTTGGATGGGTCTCAACTTAGTTCATGGGTTGAACGAGGCAGTAACTTGAAGGGTGAGAATAGTGTATCAACTGCATATTCCCAAAGGCCGGATGAAGTTTCCAAATCCAACCATAAAAGACTTAAGCTGGTAGAGAACCCTAGACCTAGGCCCAAAGATCGTCAGATGTTCCAAGATCGCATGAAAGAATTGCGAGAAATTGTGCCTAATGGGGCAAAATGTAGCAAAGATGAGCTCCTTGGACGCACCATTAGCCACATGCTTTTTTTGCAAAGCGTAACAAAGCATGCAGACAGACTCAAACAAACAGGAGAGTCAAAGTTTATTGGAAAGGATGGTGGACTCCTTTTGAGAGACAACTTTGAGGGAGGAGCTACTTGGGCATATGAGGTTGGCTCACAATCTATGGTTTGTCCTATTATTGTTGAGGATTTGAATCAGCCAAGGCAGATGCTAGTGGAGATGTTTTGTGACGAAAGGGGTTTCTTTTTGGAAATAGCTGACTTTATTAGAGGATTGGGTTTAACCATATTGAAAGGGGTTATGGAAGTTAAAAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAATAGGGACGTCACAAGGATGGAGATATTTATGTCACTGGTTCGTTTGTTGGAGTAA 2049 0.4173 MKIKLVTFLCGYLSYPTFKLMEFLWKETLKRLCGSNQWSYAVFWKIGCQNPRLLIWEDHHYEPSPRSTRHCMAAVGTSSLAEGWVSAGSHSTQLGDHEVDRVAKLINEMMMNNQVNFVGEGMVGRAAFTGKHQWIVLNDCSRDAHPPEFLTTVHHQIAAGMQTLAVIPVLPHGVVQFGSSHEIMENFRFVNDVKRLILQLGCTPKALLSENYTTKVTGENMGVPVTHGVPLHANSQGTSTVANFSSAANGMVNLQNEFSHISLPPGQLSDYLLKIVNNPSIVTGINDGQCNDMMNGDSVNMLAKQESCAQPLSGNDLFDVLGVDLKHKLLSENWNDLVSTDTHFNANTSGKNNPTFGDMQEIGLDCFSVNEAISDGGVFSETGSDNLLNAVVSKAQTSLKRISDDNLSCKTMLTRSSSSSLPSSSLTNRQVNMNDDFLQALARSAQTNSLNSVCSKDDRGISSQTTSLDGSQLSSWVERGSNLKGENSVSTAYSQRPDEVSKSNHKRLKLVENPRPRPKDRQMFQDRMKELREIVPNGAKCSKDELLGRTISHMLFLQSVTKHADRLKQTGESKFIGKDGGLLLRDNFEGGATWAYEVGSQSMVCPIIVEDLNQPRQMLVEMFCDERGFFLEIADFIRGLGLTILKGVMEVKNDKIWARFAVEANRDVTRMEIFMSLVRLLE* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00609 682 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 297 682 IPR043561 GO:0003700|GO:0006355
Pte17g00609 682 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 508 557 IPR011598 GO:0046983
Pte17g00609 682 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 26 196 IPR025610 -
Pte17g00609 682 MobiDBLite consensus disorder prediction 452 504 - -
Pte17g00609 682 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 521 563 IPR036638 GO:0046983
Pte17g00609 682 MobiDBLite consensus disorder prediction 452 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00609 Pte-Chr17 10310562 10320054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00609 21 682 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.974 1.50e-176 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00609 - - thj:104801509 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00609 17 10310562 10320054 Pte17g00609 17 10310562 10320054 RCT