Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00595 ATGAAGTGCTCTGGTTGTCAAGGAAGTGGTATGAAGGTTACAATCAGACAATTGGGTCCTGGTATGATCCAACAAATGCAGCACCCGTGCAATGAATGCAAGGGTACTGGCGAAACTATAAATGATAAAGACCGCTGCTCACAGTGCAAGGGAGAGAAGGTTGTTCAAGAGAAGAAAGTGTTGGAAGTTATTGTGGAGAAAGGAATGCAGAATGGACAGAAGATAACGTTCCCCGGTGAAGCTGATGAAGCGCCTGATACTGTGACTGGGGATATAGTTTTCGTACTTCAACAGAAGGAACACCCTAAGTTCAAGCGAAAGGGGGAGGACCTTTTCCTAGAACACACCTTGTCTCTCATGGAAGCTCTCTGCGGATTCCAGTTTGTGTTAACTCACTTGGATGGCAGGCAGCTTCTAATCAAATCTAATCCTGGTGAAGTTGTCAAGCCTGATTCATTCAAGGCAATCAATGAAGAGGGAATGCCTATGTACCAAAGGCCTTTCATGAAGGGAAAACTATACATTCACTTCAATGTGGAGTTTCCTGATTCTCTAAGTCCTGAACAAGTTAAAGCTTTTGAAGCTGTGGTACCACGTAAGCCTTCATCCCCATTGACAGATATGGAGTTAGACGAGTGTGAAGAGACCACACTTCATGATGTGAACATTGAGGAGGTAACGAGGAGGAAGCACCAGCAGCAGGAGGCATATGAGGAAGATGAAGATGACATGCATGGGGGTGCTCAAAGGGTGCAGTGTGCTCAACAGTGA 771 0.454 MKCSGCQGSGMKVTIRQLGPGMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFLEHTLSLMEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAINEEGMPMYQRPFMKGKLYIHFNVEFPDSLSPEQVKAFEAVVPRKPSSPLTDMELDECEETTLHDVNIEEVTRRKHQQQEAYEEDEDDMHGGAQRVQCAQQ* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00595 256 MobiDBLite consensus disorder prediction 224 256 - -
Pte17g00595 256 Gene3D - 101 183 - -
Pte17g00595 256 FunFam Chaperone protein dnaJ 3 54 94 - -
Pte17g00595 256 CDD DnaJ_C 52 185 - -
Pte17g00595 256 MobiDBLite consensus disorder prediction 224 247 - -
Pte17g00595 256 ProSiteProfiles Zinc finger CR-type profile. 1 58 IPR001305 GO:0031072|GO:0051082
Pte17g00595 256 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 2 56 IPR036410 -
Pte17g00595 256 Coils Coil 223 243 - -
Pte17g00595 256 Pfam DnaJ C terminal domain 54 182 IPR002939 -
Pte17g00595 256 FunFam DnaJ subfamily A member 2 1 53 - -
Pte17g00595 256 Gene3D - 54 94 - -
Pte17g00595 256 Pfam DnaJ central domain 2 53 IPR001305 GO:0031072|GO:0051082
Pte17g00595 256 SUPERFAMILY HSP40/DnaJ peptide-binding domain 59 106 IPR008971 GO:0006457|GO:0051082
Pte17g00595 256 Gene3D - 2 53 - -
Pte17g00595 256 SUPERFAMILY HSP40/DnaJ peptide-binding domain 104 192 IPR008971 GO:0006457|GO:0051082
Pte17g00595 256 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 2 237 IPR044713 GO:0006457|GO:0030544
Pte17g00595 256 FunFam Chaperone protein dnaJ 3 128 199 - -
Pte17g00595 256 CDD DnaJ_zf 2 53 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00595 Pte-Chr17 9189142 9190098 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00595 K09503 - csv:101205422 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01549 1 37140635 37141794 Pte17g00595 17 9189142 9190098 RCT
Pte17g00595 17 9189142 9190098 Pte17g00595 17 9189142 9190098 RCT
Pte17g00595 17 9189142 9190098 Pte15g00987 15 7289901 7292720 RCT