Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte17g00583 | ATGCCGGACATAAGGAAGTGGTTTATGAAATCACACGACGGGGGCAAAGGCAATGACAGCGATTCTAACACAACAAACCAGCCTAAACCTTCTGTTCCTTCTGCAAACTCACAACCTCAAAAAGCGGTGCAAGTAAGCAAAGAGAGTTCAGGAAGAAGGAAAACAAGCAAATATTTTTCTGCAGAAAAACAAAAGCCAAAGGGAGAAACAGAGGAACTTCCTATCAAGAGGAAGCAAAAGGACGATGATGAATTGGTCAAGCCCCCTCCTTCTATGAAAAATCATAAAATTGAAGATGACAACGACGACTTTGACATGCCCAGAGCTGCTGCAAAGAAGTCAGTATATGCCACTCCAAGTAAGAAATTTAAGAGTGTATATGGGAAGGAAGTTCCGCAGAAATGTGCAAATGTTGAGGAGAGTGATGAAGATGATGAAAAAGATAATGTATCACCTCTTAAATCTGCTGGAAGGGGTCGTGGTGGAAGGGGTTCATCATCAGCACCAGCTGGTGGGCGAGGCAGGGGTGGAGGAAGAGGTGGATTTATGAATTTTGGTGAAAGAAAAGAACCTCCAAATAAAGGACAAAAGGAAGTTCCTGAAGGTGCTCCAGATTGTTTAGCCGGTCTAACTTTTGTGATAAGTGGAACGCTGGACAGTTTGGAGCGAGAAGAAGCAGAAGATTTGATAAAACGCCATGGTGGTCGTGTCACTGGATCTGTTAGCAAGAAGACGAATTATCTTTTATGTGATGAAGATATCGGTGGCCGAAAATCTGCCAAAGCAAAAGAGCTGGGTACTGCCTTCCTCACTGAAGATGGATTGTTTGATATGATACGGGCATCAAAGCCATCAAAAGTTTCTGTAAAACAAGAACCGAAGAAAATGGAGGATAAGGCTTCTGCATCTTTTTCTAAGGGTAGCCCCCAGAAAGTACAAGCAAAGAATTCTCCTCTGTCTATGCCTAAAGCTCAAAGTGCAAATGATTCATCGTTGATTTGGACAGAAAAGTATAGGCCAAAGGTTCCAAATGACATGGTTGGAAACCAAGCATTGGTAAAGCAACTTCATGATTGGTTGGCACATTGGCATGAGCAATTTCTTGATGGTGCAAATGCAAAAAAAGGTAAAAAGCAAAGTGATTCTGGTGCTAAAAAGGCGGTGCTATTAAGTGGAACACCTGGTATTGGGAAAACGACTTCAGCAAAATTAGTCAGTCAGATGCTAGGGTTTCAGGCAATTGAGGTTAATGCTAGTGACAACCGTGGAAAGGCTGATTCCAAAATTGAGAAAGGAATTTCTGGAAGCAATGCAAATTCTATTAAGGAGCTTGTAAGCAACGAGGCCCTTAGTACCAACATGGATAGGTCAAAACATCCCAAAACTGTGCTTATTATGGATGAAGTTGACGGCATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGTATCAAGACCTCAAAAATACCTATCATTTGTATTTGCAATGACCGTTACAATCAGAAACTGAAAAGTCTTGTTAACTATTGTCTGCTACTTACCTTTCGAAAACCAACAAAACATCAGATGGCGAAGAGGTTAATGCAGGTTGCAAATTGTGAGGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAATTAGCAGAGAGAGTAAATGGAGATATGCGTATGGCTCTAAACCACTTACAGTATATGAGCCTCTCAATGTCAGTCATCAACTACGATAATATCAGGCAGCGTCTACTTGCCAGTTCAAAAGACGAAGACATTTCACCATTTACGGCAGTCGACAAGCTTTTTGGATTTAATGCTGGAAGGTTAAAAATGGATGAGCGTATTGACCTTGGAATGAGTGACCCTGACCTCGTTCCTCTTCTCATCCAGGAAAACTATATTAACTATAGGCCCAGCTCAACTGGTAAAGAAGACGGCGACATTACACGGATGAAGTTGATTGCCCAAGCTGCTGAGTCTATTGCGGATGGAGATATAGTAAATGTACAGATTAGGAGATATCGGCAGTGGCAGCTCTCTCAAACTAGCTGTTTTGCTTCCTCCATTGTTCCTGCATCGTTGTTGCATGGACAAAGGGAGATACTTGAACAGGGAGAACGGAACTACAATAGATTTGGTGGGTGGCTTGGAAAGAACTCAACGATGGGAAAAAATATAAGGCTTTTAGAAGATTTGCATCTCCATGTTCTTGCTTCTCGTGAATCTAGTTCAGGCAGGGGAACTCTCCGTTTGGAATACCTGACACTTCTACTCAAGCGATTAACCGAGCCACTCCATACCTTGCCTAAGGATGAAGCTGTTCAGAAAGTTGTGCATTTTATGAATGAATACTCGATTAGTCAAGAAGACTTTGATACGATAGTTGAATTATCAAAATTTAAGGGCCATCCAAATCCACTGGATGGGGTACAGCCTGCAGTTAAAGCAGCTTTAACAAAAGCATACAAAGAAGGAAGCAAAATGAGGATGGTGAAAGCTGCAGATCTGGTGACACTTCCTGGAGTAAAAAAGACTCCTAAGAAAAGGATTGCTGCAATCTTGGAACCTCCGCCTGAAGGTCTGGGGGAGGTTGGTGGTGAGCTATTGACAGAAAGCGAAGAGGATTCTTCAGATACAGAGGAATCTGTAGACGGCAACAGAACTGGTGAAAAGCTGCGGCAGGAACTTCAGAGCTTAAATTCTAAAGCAACACAAGTGCAGTTGGATTTGAAAGGAACCATAGCTGGAACTTCAAGTGGCAAGAGCACATCTACTGGTACTGGTAGAGGTAGGGGTGGTTCTACTTCCGCAAAGAAGGAACGTGAGGCTGGTTCACGTTCTAGTGCTAAGAGAAAGAGATGA | 2862 | 0.4263 | MPDIRKWFMKSHDGGKGNDSDSNTTNQPKPSVPSANSQPQKAVQVSKESSGRRKTSKYFSAEKQKPKGETEELPIKRKQKDDDELVKPPPSMKNHKIEDDNDDFDMPRAAAKKSVYATPSKKFKSVYGKEVPQKCANVEESDEDDEKDNVSPLKSAGRGRGGRGSSSAPAGGRGRGGGRGGFMNFGERKEPPNKGQKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSAKAKELGTAFLTEDGLFDMIRASKPSKVSVKQEPKKMEDKASASFSKGSPQKVQAKNSPLSMPKAQSANDSSLIWTEKYRPKVPNDMVGNQALVKQLHDWLAHWHEQFLDGANAKKGKKQSDSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKADSKIEKGISGSNANSIKELVSNEALSTNMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYNQKLKSLVNYCLLLTFRKPTKHQMAKRLMQVANCEGLQVNEIALEELAERVNGDMRMALNHLQYMSLSMSVINYDNIRQRLLASSKDEDISPFTAVDKLFGFNAGRLKMDERIDLGMSDPDLVPLLIQENYINYRPSSTGKEDGDITRMKLIAQAAESIADGDIVNVQIRRYRQWQLSQTSCFASSIVPASLLHGQREILEQGERNYNRFGGWLGKNSTMGKNIRLLEDLHLHVLASRESSSGRGTLRLEYLTLLLKRLTEPLHTLPKDEAVQKVVHFMNEYSISQEDFDTIVELSKFKGHPNPLDGVQPAVKAALTKAYKEGSKMRMVKAADLVTLPGVKKTPKKRIAAILEPPPEGLGEVGGELLTESEEDSSDTEESVDGNRTGEKLRQELQSLNSKATQVQLDLKGTIAGTSSGKSTSTGTGRGRGGSTSAKKEREAGSRSSAKRKR* | 954 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte17g00583 | 953 | Gene3D | - | 521 | 591 | - | - | |
| Pte17g00583 | 953 | Coils | Coil | 889 | 909 | - | - | |
| Pte17g00583 | 953 | Pfam | Replication factor RFC1 C terminal domain | 661 | 823 | IPR013725 | GO:0003689|GO:0005524|GO:0005663|GO:0006260 | |
| Pte17g00583 | 953 | MobiDBLite | consensus disorder prediction | 47 | 109 | - | - | |
| Pte17g00583 | 953 | FunFam | Replication factor C subunit 1 | 593 | 702 | - | - | |
| Pte17g00583 | 953 | SMART | BRCT_7 | 204 | 282 | IPR001357 | - | |
| Pte17g00583 | 953 | CDD | AAA | 381 | 521 | - | - | |
| Pte17g00583 | 953 | FunFam | Replication factor C subunit 1 | 521 | 592 | - | - | |
| Pte17g00583 | 953 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 592 | 737 | IPR008921 | GO:0003677|GO:0006260 | |
| Pte17g00583 | 953 | MobiDBLite | consensus disorder prediction | 892 | 932 | - | - |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte17g00583 | K10754 | - | cave:132163425 | 1279.23 |
Showing 1 to 1 of 1 entries