Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00576 ATGGCTGTGTTATTTGCTGAAATCTGGTTCAGATATTGTGTTAGATCGTTCTTGGCAAAAGCTGCTGGCATCCAGACTATTGTTTCAGTCTCAATTGATTTAGGAGTGCTGGAATTGGGTTCTGTAAGGCAAGTACGTGAGAGCTTTGAGTTATTGCATACAATAAAGATGGTGTTTTCTACAAACTCATCAATCACCAAAGCCAGGCCTCTGTCTTCGCTGCCTGTATTCAATGGGAAGAATGGTGAAAGTGTAATTTCCTCACATCTGGTAGTTGAGGACAAAGGGAGAGTTCCTAAAATTTTTGGCGAGAATTTAAATTCAGGAGACTTAGGTCACCCATATTTAAGAGAGAAGCTTGCCATTAGGAAGATGGAGGATAAGCCTGGGGAGGAATACCCGAATGGAAGTAGAATTTCCTTAACAAGCTCTATAAATGGTAGTATTCATGTTTCAAGCTGGTTATCCATCCCTGGTGTGAAACAAACTAGTCCCATTGAAATTTATGGCTCTCGCGGTTTGGCAGACATTAAGTGA 537 0.4097 MAVLFAEIWFRYCVRSFLAKAAGIQTIVSVSIDLGVLELGSVRQVRESFELLHTIKMVFSTNSSITKARPLSSLPVFNGKNGESVISSHLVVEDKGRVPKIFGENLNSGDLGHPYLREKLAIRKMEDKPGEEYPNGSRISLTSSINGSIHVSSWLSIPGVKQTSPIEIYGSRGLADIK* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00576 178 PANTHER MYC 10 83 IPR045084 GO:0003700|GO:0006355
Pte17g00576 178 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 11 59 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00576 Pte-Chr17 8576984 8577520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00576 12 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 35.359 4.04e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00576 - - qsa:O6P43_027387 172.555