Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00575 ATGGCCAAAGGAGGTGGACTCTCCATTGATTCAGATCCATTTGGGTGCTTCTTTTCTCACAAACCTGTAGTACTCAACTCATTTTCTGAACACAACAGCTCAAAGTGGAAATTCATGGATACCACTTTTAATAAATCCAACATCCTTAGCAATAGCACGAGTACTTCTCCTCCTAATACTCTCCAATTCCAAGTCAACCTTAACCATTCTCATGATGATCAAAATTTACCCATACCCTCTGAGGAGAAGCATAGGGCCATCGATGAGAGGGACTTCTTTGCTGAAAAGAGCAAGAAGGATGACGATGTTGACGGACTTGCCTCCACCTCTACATATGCCGAGAAATATGACACGATTGCTCCTTCAATATTGGAACTTAAAGTGAACACTGGTTTGAATCTTCTTACTACAAACACGGGTAGTGATGAATCCATGGTAGACGATGAAGAGTCACCTAACTCGGAAGATAAAAGATCAAACACTGAGTTGGTTGTTCTTCAAGCTGAGCTGGAGCGAATGAAAACGGAGAATCACAGATTGAAAGACATGCTGGATCAAGTTTCGAACGATTATAACGTTCTGCAGAACCATTTGGTAAATTTGATGCAAGAGAGGAAAGCCAATCAAGACACTGCAGAATGTGAAGAATTAGATGGAAAAGTAGAAGACAAGAAACACAGTCCAACTAATGGCGCTGTGGTGCCACGGAAGTTTATGGATCTTAGGTTGGCTTCGAACGCTGATCATACTAATGAGCCATCGCTTTCTTCTTCTGATGGAAGAAGCCAGGATCGGTCAACATCGCAAGGTACTAACGATGAGGATAGGAAGGGATTGGGAAGGGGACAAAGGAGAGACGGTAGCCGTGATCTGAGTTTCAACCCCAGCAAGGTTGCAAGGCTTAGTCCTACTGAAAATGAGGATCAAATGGAAGCAACAATGAGGAAAGCACGGGTTTCAGTTCGAGCTCGCTCAGAGGCACCAATGATAACGGATGGCTGTCAATGGCGGAAGTATGGACAGAAAATGGCCAAGGGAAATCCATGTCCTCGAGCTTACTATCGCTGCACCATGGCGGCTGGTTGTCCCGTGAGAAAACAGGCACGTTGTCACTTCTAA 1119 0.4441 MAKGGGLSIDSDPFGCFFSHKPVVLNSFSEHNSSKWKFMDTTFNKSNILSNSTSTSPPNTLQFQVNLNHSHDDQNLPIPSEEKHRAIDERDFFAEKSKKDDDVDGLASTSTYAEKYDTIAPSILELKVNTGLNLLTTNTGSDESMVDDEESPNSEDKRSNTELVVLQAELERMKTENHRLKDMLDQVSNDYNVLQNHLVNLMQERKANQDTAECEELDGKVEDKKHSPTNGAVVPRKFMDLRLASNADHTNEPSLSSSDGRSQDRSTSQGTNDEDRKGLGRGQRRDGSRDLSFNPSKVARLSPTENEDQMEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQARCHF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00575 372 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 136 368 IPR044810 GO:0003700
Pte17g00575 372 MobiDBLite consensus disorder prediction 210 236 - -
Pte17g00575 372 SMART WRKY_cls 330 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g00575 372 ProSiteProfiles WRKY domain profile. 325 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g00575 372 MobiDBLite consensus disorder prediction 268 291 - -
Pte17g00575 372 SUPERFAMILY WRKY DNA-binding domain 323 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g00575 372 MobiDBLite consensus disorder prediction 137 159 - -
Pte17g00575 372 MobiDBLite consensus disorder prediction 248 311 - -
Pte17g00575 372 Gene3D WRKY domain 317 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g00575 372 Pfam WRKY DNA -binding domain 332 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g00575 372 MobiDBLite consensus disorder prediction 248 267 - -
Pte17g00575 372 MobiDBLite consensus disorder prediction 210 230 - -
Pte17g00575 372 Coils Coil 163 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00575 Pte-Chr17 8493929 8495518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00575 128 370 WRKY Transcription Factor Family AT1G62300 53.252 2.47e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte17g00575 WRKY 3.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00575 - - qsa:O6P43_028660 410.223