Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00574 ATGAAGCAGGTGCAAAGGTGTGCTGAAGATCGAAGCATCCTTATCACCACATACGAAGGCAATCACAATCACCCTTTGCCCCCAGCAGCCATGGCGATGGCACAATCTACTTCATCGGCTGCACGTATGCTGCTTTCAGGATCCATGTCAAGCAATGATGGTAGCATAATGAATGCAAATTTTCTCAGCAGGACACTCCTGCCTTGTTCTTCAAGCATGGCAACCATTTCAGCTTCAGCTCCTTTTCCTACTATTACATTAGACTTGACACAGTCTTCAAACCCTTTACAGTTGCAAAGGCAACCAAACCAGTTCCACTTACCATTCTCAAATCCACCTCAGAATTTTTCCAATGGTGCTGCCTCATTTCTGCCTCAAATATTTGGTCAGGCTCTCTATAACCAATCCAAATTCTCTGGCCTTCAATTGTCTCAAGAAACCGACATTTCTCAATTTGAACACCGACCACCTGCACAATTAGCTGATTCAGTTAGGGCAGCCATTGCAGCTGACCCCAACTTCACTGCAGCTCTTGCTGCGGCCATCAGTTCTCTCATGGGCGGTGCTCATCCAAATGCCAATAACAATAACAATGCCAATCTGATCAGTAATGCTAATCACAATGTCAACGACAACACCTCAGCTAGTTGTAACAGTCAAAAAGATCAGCAGCTGAAACAATAA 684 0.4474 MKQVQRCAEDRSILITTYEGNHNHPLPPAAMAMAQSTSSAARMLLSGSMSSNDGSIMNANFLSRTLLPCSSSMATISASAPFPTITLDLTQSSNPLQLQRQPNQFHLPFSNPPQNFSNGAASFLPQIFGQALYNQSKFSGLQLSQETDISQFEHRPPAQLADSVRAAIAADPNFTAALAAAISSLMGGAHPNANNNNNANLISNANHNVNDNTSASCNSQKDQQLKQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00574 227 ProSiteProfiles WRKY domain profile. 1 27 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g00574 227 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 203 IPR044810 GO:0003700
Pte17g00574 227 MobiDBLite consensus disorder prediction 197 227 - -
Pte17g00574 227 SUPERFAMILY WRKY DNA-binding domain 2 27 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g00574 227 Gene3D WRKY domain 1 28 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00574 Pte-Chr17 8493016 8493836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00574 2 200 WRKY Transcription Factor Family AT1G62300 54.167 4.31e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte17g00574 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00574 - - qsa:O6P43_000560 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00574 17 8493016 8493836 Pte9g01296 9 34384053 34386670 RCT
Pte17g00574 17 8493016 8493836 Pte2g00439 2 3408636 3411450 RCT
Pte17g00574 17 8493016 8493836 Pte17g00574 17 8493016 8493836 RCT