Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00573 ATGGACTGGAGCAGAGGTCATACAATTGGGCGGGGCTCATCAGCCACCGTCTCCCTCGCCACCGTCTCCGGTGATGCTTTTGCTGTCAAGTCAGCTGAATTACGCCATTCTGAGATGCTGCAAAGAGAGCAGAGGATTCTTTCTAACTTGAGTTCTCCCCACGTGGTCAAGTACAAGGGATGCGATGTCACCAGAGAGAATAACAAGATCATGTACAATATTTTCATGGAATACATGCCGCATGGGACTCTAACCGAAGAAATTCGCAGACATGGGGGTCGACTTGAAGAGCCGATGATCGCTTTCTACACACGGCAAATGCTTCAGGGTCTTGAGTATTTACATTCAAATGGGGTAGCGCATTGTGATATGAAAGGAAGCAATATCTTGATTAGTGAAGAGGGTGCTAAAGTTTCAGACTTTGGATGTGCTAAATGGGTTCTCAACTCAGAGAAGGCCCAGCAGGTCGAGTCATACGTAGGAGGAACACCCATGTATATGGCACCAGAGGTGGCGCGTGGAGAAGAACAAGGGTACCCTTGTGATATTTGGGCAGTTGGGTGTACGGTAATCGAAATGGCTACCGGGTTAGCACCTTGGAGTAATGTGTCCGACCCAGTGTCAGTTCTGTATCGTATAGCATATTCCGAGGAATCACCTGAAGTTCCGAGCTTTTTGTGTCACGAAGCAAAGGATTTCTTGGAGAAATGCTTGAAGAGGAATCCAAAGGAGAGGTGGACGGCTAGTAAACTTCTGCAACATCCGTTTCTTGAGGAACACAATGGGTATGAGAGTAAAAAACAAATACGGGAATCTAATTCAAGTTCCCCAACAAGTATTCTTGATCATGGCTATTGGAATTCTGTAGTGGAATCAAATACATCATCAAGTAATTTGATCTTTACAAGTTTTGAACATTCCCCTGTCGAGAGAATCAGAGAATTGGCTCTTATTTCAGGGGAACCTAGTTGGACATGGAATGAGGATTGGACAGCAGTGAGGGAGGACAAACAAGAGGTTGAAGTTAACGGAGACATGGTCTTCCTGTCAGAAACAGCTTCAGTTAGCTCTGGTGTACAGGAGTTAGTAAAAAGTAATGTTACCGGTAGAACCACAGGGAGTCATTATTATTTGGATGATTACAGATGTAAAAAAGTTAGCTTAGTAACGGGTCCTCTCAATTTTGAAGGAACCGTTGATGGGGCGGTACTTCATTCAATCTCATTATGTTTGTAA 1236 0.445 MDWSRGHTIGRGSSATVSLATVSGDAFAVKSAELRHSEMLQREQRILSNLSSPHVVKYKGCDVTRENNKIMYNIFMEYMPHGTLTEEIRRHGGRLEEPMIAFYTRQMLQGLEYLHSNGVAHCDMKGSNILISEEGAKVSDFGCAKWVLNSEKAQQVESYVGGTPMYMAPEVARGEEQGYPCDIWAVGCTVIEMATGLAPWSNVSDPVSVLYRIAYSEESPEVPSFLCHEAKDFLEKCLKRNPKERWTASKLLQHPFLEEHNGYESKKQIRESNSSSPTSILDHGYWNSVVESNTSSSNLIFTSFEHSPVERIRELALISGEPSWTWNEDWTAVREDKQEVEVNGDMVFLSETASVSSGVQELVKSNVTGRTTGSHYYLDDYRCKKVSLVTGPLNFEGTVDGAVLHSISLCL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00573 411 Gene3D Transferase(Phosphotransferase) domain 1 2 320 - -
Pte17g00573 411 CDD STKc_MAPKKK 2 257 - -
Pte17g00573 411 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 320 - -
Pte17g00573 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pte17g00573 411 SUPERFAMILY Protein kinase-like (PK-like) 3 291 IPR011009 -
Pte17g00573 411 FunFam Mitogen-activated protein kinase kinase kinase 17 2 311 - -
Pte17g00573 411 Pfam Protein kinase domain 5 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00573 411 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Pte17g00573 411 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00573 411 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00573 Pte-Chr17 8440176 8441411 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00573 2 334 MAP Kinase Kinase Kinase AT5G55090 49.138 9.32e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte17g00573 Pkinase 3.8e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00573 K20716 - qsa:O6P43_028662 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00573 17 8440176 8441411 Pte9g01130 9 33046537 33047334 RCT
Pte17g00573 17 8440176 8441411 Pte2g00437 2 3397240 3398751 RCT
Pte17g00573 17 8440176 8441411 Pte17g00573 17 8440176 8441411 RCT