Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00567 ATGCCGAGAATGATAAACAAAAACTACAAAGACAGTTTGCAGAACTCAGAGGCAGATTCAGATCAAGGCAATCAGGATCAGCTAAGGAAGAGGTTGAAGAAGGGGCCATGGACAGCAACAGAGGACGCAATCTTGATGGAGTACGTAAAGAGATATGGTGAAGGGAATTGGAATTCTGTACAGAAGAATTCAGGATTGGCTAGATGCGGGAAAAGCTGTAGGCTCAGATGGGCAAACCACCTTAGGCCTAATCTAAAAAAAGGTTCTTTCACTCCTGAGGAAGAAAGGATCATCATCGAGCTTCACGCTAAGATTGGAAACAAGTGGGCTCGCATGGCAGCACAGTTACCAGGACGAACAGACAATGAGATAAAAAATTATTGGAATACGAGAATAAAGAGGCGAGAACGAGCAGGATTACCGATTTACCCCCATGACATTCAACAAGAAGCCATTGCATACCCACTTCAACAGGAGCAGGAGCAGGAGCAACGGCAGCAGCAAATCCCTTCCGCTACATCATTTTCTCCAGCATTTTTCTCTGCACCTCAGCTAAACAAGCTCAATTACAACACCCCGAACCATGTCGTGGACCCGTTAAGTTTTATTTCTTATGCAAACAACCTTCAAAATCCGACCCATTACGATGTTTACTCCCAGCAAAACAATCTGGTCAAAGTTTTTTTCAGTGAAAGCATGAACCATTGTGGTTTAGCAAAATCAGTGTCCCCCGTTTCTCCTTATGACGAGTCATCGTCTTCTACAGTTCTCAATCAGGGCTTTGCCTGTCAGTCTATTCCAACTCAATCGCATGATTACAACAGAAGTGGAAGCAACCCTTTCGGGTTGAGCTTCACTGCTATGCTTATGGGGGTGGAGCCTTATGAGACAATTGAGATGTTGTCTGCTAAGGAAACAGAGGTCCCTTCAATCCAAACGCCGTCTTTGTCTTTAACACCCGCGTCATCCTACACCAACAGTGTTGAAGTTTTTAAAGCTGGTTCAACTCGTGCCTCTGAGTACAAACAAGCCTCTATGTCATCATCGCAAAAGAACAATGGCTTGCTGGAAGATTTGGTGTTGCAGGGACGTCAGTCAATCTCTGGCAGCTCCAGTTCTAGAAGTGATAATCATAATATATCTGATAAAGGGAAAAGTATCAAGGCAGATGAGTTTGTTGAGGAAGAAGACACCATGATTCACAAACATAATGAAACTCATATTTCTAATTCCCAAAGAGATGAAAAAACATTCTCTCCTCCATCTTCAACTGAGAAACCCATAATGGGCGGTCCCTTGGATGAGATGAATCCCATGGATGATGACTTGTTGTGCTTGCTGACCAACTTTCCTTCATGCATGCCATTGCCGGAGTGGTACAGAAGAGGCGAAGGACACACAACAAGCATGACGTCTAATCAGAAGGTCCAACATGATAGTACTGATCTATTCTGA 1455 0.4385 MPRMINKNYKDSLQNSEADSDQGNQDQLRKRLKKGPWTATEDAILMEYVKRYGEGNWNSVQKNSGLARCGKSCRLRWANHLRPNLKKGSFTPEEERIIIELHAKIGNKWARMAAQLPGRTDNEIKNYWNTRIKRRERAGLPIYPHDIQQEAIAYPLQQEQEQEQRQQQIPSATSFSPAFFSAPQLNKLNYNTPNHVVDPLSFISYANNLQNPTHYDVYSQQNNLVKVFFSESMNHCGLAKSVSPVSPYDESSSSTVLNQGFACQSIPTQSHDYNRSGSNPFGLSFTAMLMGVEPYETIEMLSAKETEVPSIQTPSLSLTPASSYTNSVEVFKAGSTRASEYKQASMSSSQKNNGLLEDLVLQGRQSISGSSSSRSDNHNISDKGKSIKADEFVEEEDTMIHKHNETHISNSQRDEKTFSPPSSTEKPIMGGPLDEMNPMDDDLLCLLTNFPSCMPLPEWYRRGEGHTTSMTSNQKVQHDSTDLF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00567 484 FunFam Transcription factor MYB97 89 169 - -
Pte17g00567 484 MobiDBLite consensus disorder prediction 365 390 - -
Pte17g00567 484 CDD SANT 36 81 IPR001005 -
Pte17g00567 484 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Pte17g00567 484 MobiDBLite consensus disorder prediction 1 34 - -
Pte17g00567 484 SMART sant 86 134 IPR001005 -
Pte17g00567 484 SMART sant 33 83 IPR001005 -
Pte17g00567 484 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Pte17g00567 484 FunFam MYB-related transcription factor 33 86 - -
Pte17g00567 484 Pfam Myb-like DNA-binding domain 34 81 IPR001005 -
Pte17g00567 484 Pfam Myb-like DNA-binding domain 87 130 IPR001005 -
Pte17g00567 484 SUPERFAMILY Homeodomain-like 31 128 IPR009057 -
Pte17g00567 484 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 81 IPR017930 -
Pte17g00567 484 Gene3D - 33 86 - -
Pte17g00567 484 CDD SANT 89 130 IPR001005 -
Pte17g00567 484 Gene3D - 89 135 - -
Pte17g00567 484 MobiDBLite consensus disorder prediction 465 484 - -
Pte17g00567 484 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Pte17g00567 484 MobiDBLite consensus disorder prediction 8 22 - -
Pte17g00567 484 MobiDBLite consensus disorder prediction 403 425 - -
Pte17g00567 484 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 16 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00567 Pte-Chr17 8201386 8203466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00567 30 464 MYB Transcription Factor Family AT2G32460 36.326 7.85e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte17g00567 Myb_DNA-binding 4.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00567 K09422 - qsu:111998963 384.8