Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00553 ATGGTGGAATTACTTTTTTTAGCCCGAAAGGTAGTAACTTGTGTTCACCATGTTGCTGCAGAGGAGCAATCTAGGGAAGATAGGAAACTTCAGTTTTCTGAAGATGAGGAAACGCTCATTTTGAGGATGTATAATTTGGTAGGCCGAAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACATCAAAGGAAATTGAGAAATATTGGACTTCAAGAAACTCCAACACCCAATGA 237 0.4008 MVELLFLARKVVTCVHHVAAEEQSREDRKLQFSEDEETLILRMYNLVGRRWSLIAGRIPGRTSKEIEKYWTSRNSNTQ* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00553 78 Gene3D - 31 75 - -
Pte17g00553 78 SUPERFAMILY Homeodomain-like 31 72 IPR009057 -
Pte17g00553 78 SMART sant 28 76 IPR001005 -
Pte17g00553 78 FunFam MYB-like transcription factor 31 73 - -
Pte17g00553 78 ProSiteProfiles Myb-like domain profile. 24 74 IPR001005 -
Pte17g00553 78 CDD SANT 32 70 IPR001005 -
Pte17g00553 78 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 78 IPR017930 -
Pte17g00553 78 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 30 75 - -
Pte17g00553 78 Pfam Myb-like DNA-binding domain 31 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00553 Pte-Chr17 7862515 7862845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00553 33 72 MYB Transcription Factor Family AT3G13540 65.000 1.04e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte17g00553 Myb_DNA-binding 1.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00553 - - twl:120000561 97.0561