Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00547 ATGTACGGAACACCAGTTGGTCATCCGGTAGCTGCTCCCCCAGGACACATGGTATCTACGGTTGGGACCCCAGTGATGCTACCTTCTATAGGACCCCTTTCCCATCCCCATGCCCCTTACGTTGTCCCACTTGCTTATCCAATGGCACCTCCAGCACCACCACATCCACCGCAGCGCCAACAAGATCAGCAGCCTAATTCAGAAGATGATCATAACCAAAGGTCGCAGTTCTCATCTGGCGATCAAGATGGTTCCCGCCAAGGTCTTGAGCTCGTCTCCATCACTTCGGCCAGCTACGGTGATGTGGTCGCACGCCGTCCCCGAGGTCGACCATTCGGATCAAAAAACGGACCCAAACCACCAGTCATAATAACAAGAGAGAGCCCCAACACCCTTAGAGCTCATATTCTTGAAGTGGGCAATGGATGCGACGTCTTCAACTGCGTGGCTACCTATGCCAAGCGTCGGCAACAAGGGATCTGCATCCTCAACGGCAGTGGTACAGTCACTAACGTTAGCTTGAGGCAGCCGTCTGTCAAGCATGAGAAGTACCATATGAAAACTCTCTGTTTTCCTAAAGCTCTCAAACTTGAGCTTTACATTGCTCTCTGTTTTCCTCAAAGCTACTGCACAACAATAGTTTCAAACATAGTTGATTTCTGTCAATTCTAG 672 0.503 MYGTPVGHPVAAPPGHMVSTVGTPVMLPSIGPLSHPHAPYVVPLAYPMAPPAPPHPPQRQQDQQPNSEDDHNQRSQFSSGDQDGSRQGLELVSITSASYGDVVARRPRGRPFGSKNGPKPPVIITRESPNTLRAHILEVGNGCDVFNCVATYAKRRQQGICILNGSGTVTNVSLRQPSVKHEKYHMKTLCFPKALKLELYIALCFPQSYCTTIVSNIVDFCQF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00547 223 MobiDBLite consensus disorder prediction 45 87 - -
Pte17g00547 223 CDD DUF296 133 189 IPR005175 -
Pte17g00547 223 MobiDBLite consensus disorder prediction 45 60 - -
Pte17g00547 223 MobiDBLite consensus disorder prediction 70 87 - -
Pte17g00547 223 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 189 - -
Pte17g00547 223 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 65 178 IPR014476 GO:0003680
Pte17g00547 223 MobiDBLite consensus disorder prediction 104 125 - -
Pte17g00547 223 Gene3D - 132 197 - -
Pte17g00547 223 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 176 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00547 Pte-Chr17 7807083 7807859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00547 103 179 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 77.922 2.34e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00547 - - jre:108980444 177.563