Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00531 ATGACATTGAGAAAAGCTGGCCGTGTCGTTTTCTATGTCATTCTGCTTTGCTCATTGACCACATTGTGTTTAGAAGGGATCAAGTGGTTGACAGTCGACTTGTTTCATATCAATAGAGATGCTATGCAATCGCCTCCAAAGATGCCACACCCATGGCCTGGCAAGGAGGAAAAGGTACGCACTCCATGCAGGAAAGAATTGATAGACAGGAAGAATACTGTCAAAGATTTCAAATCGTGCATCTATAGTGATTTGAATAATGAGCGGTTAACTGAAAGGAATGTGAACAGAACAATTGATTTTCTACCTCTGCATATGAAACAACACTTTTTGAACTGCATGAGAGCGCGAAGTGTTATCTTCCCTGATTCAGTAGAGGAGTTGGATGCGGGAACATGGTTCATGATCTGTGCTGAGACCATATTTGGCTGGCCAATTGCCTCCAGAAGATTTTTGGTTCGCGAAACGCACGATCATATTGCAGTAAGCCCTAATCCTCATACTTCATTTCCAGGTCAAGCTCCCGCTCCTAGTCCAGCTCATGCTCCTGGTCCAGCTCATGCTCCTGGTCCAGCTCATGCTCCCAGTGTACCTCCTGTTCCCACTCCAGCTCCTGGTGTTTCCCAAGCTCCTATACTGCCTCCCAGTGCACCAGCATCTGGTAGCTCAGCATCAGCTAGCTTGGCGTCACCGGTGTCCGATGCCGACATATTTGATTTACTTCCACCTCCTGGACATTCTTCGCATTCTCCTCCTGATCCATCACATGTTTCAGAAGAAAAAAAGAATAGCATTCATAAGCGAAAAGTTATTGCTCGTCAAATAGCTTCAGGAGCAGGAGGCCTCCTGCTTATTGCACTCCTTTGTGTCTGCTTTGTGAAGGATAAAAGGAAGAAAGGTGACCTAAAACTAGAACAAAACAGTGATGGACCCCTGGTTAACTTGAGCAATTTGTCCAATGGTTCTTCAATGAAAGTTGGTTCAGAAAGCAAACAGCTTGGTAATAACAGTGGGAAGCACCCTCATTCTGTTAGCAATTTGTCTACAAAACCAGAAAGTGGAGAACCATCATCAAAAGGTGTAGGACCAAGTCTTCCTTCGAATCCACCTCCTGGCACATCAATTCCACAACCCCCTGAACCACCACTCCCTCCACCTCCTCCTCCCCCTCCTCCTGCTCGTAGTCCCGCACCACCTCCTAAAAAAGCTGCTCAGCCACCACCACCTCCAAAAAAAGCTCCAGGTCCTCCAGCTCCTGTTGCACCAAACCGCCATGGAAAATCTGGTTCGAGTGTGGGAGGAGAAACTGATGATGAAGCTTCCAAAGCCAAACTGAAACCATTCTTCTGGGATAAAGTTCTTGCGAACCCTGATCACTCAATGGTCTGGCATGAGATCAGATCAGGGTCATTCCAGTTCAATGAGGAGATGATTGAAAGTCTATTTGGTTACAAGGATACAAACAAAAAGGAAAATAGGAGAGAGTCTCTAGAACCTGCAGTCCAGTACATTCGGATTATTGACCCTAAGAAAGCACAAAACTTGTCTATTATCCTTAAAGCTCTGAATGCGACAACAGAAGAAGTTGTTGATGCCCTCAGAGAAGGGAACGAGCTTCCAGTTGAACTCCTCCAAGCATTATTGAAGATGGGACCAACCACAGATGAGGAAATGAAACTTAGGATGTTCACAGGCAACCTCTCGGAGCTTTGTCCTGCTGATCGATTTCTCAAAGTATTGGTTGAAATCCCGTTTGCATTTAAGCGACTAGAGTCCATAAGTACTATGGCCACACTTCCAGAAGAAATTTCAGGCATTAAGGACTCCTTTGCAACTTTAGAGGTTGCTTGCCATACTCTCAAGGAAAGTAGATTATTCCTGAAACTACTAGAAGCAGTTCTCAAAACTGGCAATCGTATGAATGATGGCACCTTCCGGGGTGGTGCTCAAGCCTTTAGACTTGACACCCTTCTAAAGCTATCTGATGTAAAAGGAATTGATGGCAAGACGACTCTGCTGCACTTTGTTGTTCAGGAGATCATACGGTCTGAAGGCATACGAGTTATCCGCACAGCCAAAGCAGGCCAGAGTCCCGCTAGCACAAAAGAAGAGTTCATGGACGATTCTAATGAGGAATCTGAAGAACTTTATCGAAGCCTTGGTCTTCAGGTGGTTTCAGGATTAAGCAATGAACTAGAGGATGTTAAAAATGCAGCAGCAATAGATGCTGATGTACTAAGCAGTACAGTGTCAAAACTTGTCCAAGCATATCAAAAGATGAAAGATTTCCTAAACAAAGAGTTTGAAACTCTTGATGAAGACCATGAATTTGAAAAGACGGTGACAAGTTTTGTGGAGGATCATGAAGCGGAGATTACATGGATATTAGAGGAAGAGAGAAGGATTACTGCTTTGATAAAGAGCACAGCTGAGTATTTCCATGGAAATGCAGTAAGAGAAGAAGGTTTACGTTTGTTTGCTATTGTACGTGATTTCTTAATGATGTTAGATAGGGTGTGTAAGCAGGTGCATGAATCCACAGTAAAGATGGCAAGAGCTTCCAAAAAGGAGGCTCCAACTCATGGTTCCTCTTCACCTTCTCCGAGACAATCAACTTCAGATGCACACCAGCCGCTATTTCCAGCAATTCGAGGGCGGAGAACAAATGCATCCAGCTCAGATGACGAAAAACCTTCAACATAA 2703 0.4447 MTLRKAGRVVFYVILLCSLTTLCLEGIKWLTVDLFHINRDAMQSPPKMPHPWPGKEEKVRTPCRKELIDRKNTVKDFKSCIYSDLNNERLTERNVNRTIDFLPLHMKQHFLNCMRARSVIFPDSVEELDAGTWFMICAETIFGWPIASRRFLVRETHDHIAVSPNPHTSFPGQAPAPSPAHAPGPAHAPGPAHAPSVPPVPTPAPGVSQAPILPPSAPASGSSASASLASPVSDADIFDLLPPPGHSSHSPPDPSHVSEEKKNSIHKRKVIARQIASGAGGLLLIALLCVCFVKDKRKKGDLKLEQNSDGPLVNLSNLSNGSSMKVGSESKQLGNNSGKHPHSVSNLSTKPESGEPSSKGVGPSLPSNPPPGTSIPQPPEPPLPPPPPPPPPARSPAPPPKKAAQPPPPPKKAPGPPAPVAPNRHGKSGSSVGGETDDEASKAKLKPFFWDKVLANPDHSMVWHEIRSGSFQFNEEMIESLFGYKDTNKKENRRESLEPAVQYIRIIDPKKAQNLSIILKALNATTEEVVDALREGNELPVELLQALLKMGPTTDEEMKLRMFTGNLSELCPADRFLKVLVEIPFAFKRLESISTMATLPEEISGIKDSFATLEVACHTLKESRLFLKLLEAVLKTGNRMNDGTFRGGAQAFRLDTLLKLSDVKGIDGKTTLLHFVVQEIIRSEGIRVIRTAKAGQSPASTKEEFMDDSNEESEELYRSLGLQVVSGLSNELEDVKNAAAIDADVLSSTVSKLVQAYQKMKDFLNKEFETLDEDHEFEKTVTSFVEDHEAEITWILEEERRITALIKSTAEYFHGNAVREEGLRLFAIVRDFLMMLDRVCKQVHESTVKMARASKKEAPTHGSSSPSPRQSTSDAHQPLFPAIRGRRTNASSSDDEKPST* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00531 900 MobiDBLite consensus disorder prediction 858 877 - -
Pte17g00531 900 SMART it6_source 435 851 IPR015425 -
Pte17g00531 900 MobiDBLite consensus disorder prediction 303 440 - -
Pte17g00531 900 SUPERFAMILY Formin homology 2 domain (FH2 domain) 448 852 - -
Pte17g00531 900 MobiDBLite consensus disorder prediction 363 421 - -
Pte17g00531 900 MobiDBLite consensus disorder prediction 215 230 - -
Pte17g00531 900 Gene3D Formin, FH2 domain 442 865 IPR042201 -
Pte17g00531 900 ProSiteProfiles Formin homology-2 (FH2) domain profile. 435 862 IPR015425 -
Pte17g00531 900 MobiDBLite consensus disorder prediction 309 355 - -
Pte17g00531 900 MobiDBLite consensus disorder prediction 163 265 - -
Pte17g00531 900 MobiDBLite consensus disorder prediction 170 212 - -
Pte17g00531 900 Pfam Formin Homology 2 Domain 438 836 IPR015425 -
Pte17g00531 900 PANTHER FORMIN-RELATED 244 887 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte17g00531 900 MobiDBLite consensus disorder prediction 850 900 - -
Pte17g00531 900 Coils Coil 754 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00531 Pte-Chr17 7424816 7429700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00531 397 856 FH2 protein (formin) Gene Family AT5G67470 47.660 2.65e-120 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00531 - - qsa:O6P43_000616 744.191