Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00530 ATGGCTCCGAAGAAGCCCTTGTCAACTCGACCTCCCCCTCCTTCATCTTCTTCTTCTGAAGAAGAATCGGATACTGAAGACGAACAAGAACTACCACAAACCCAAACTCAAAAAAGTGGCACACCGAAAGGAAAGGAGAAAAAGTCTGATACTGAAGAAGACGATGAGGAAAATGGCGAAGACGATGAGGAGGAGGAAGAAGAAGATGTCGATGAAAAGAAGAAACCCGCTGTTAAAGTTCCCGTCTCAAAATCTAATCAACCGAATTCCCACGAATCCGATTCGGAATCCGGAACAGAATCTGGTAATTCTCAACTTTCCCCATCTCCTTCTGACTTTGAGATTGCGCCTATTTCTTCCAAACCGATGGATGATTCGACCAAATACAAGAAGGATTCCATGAAGCGCAATGTGAATATTTCTCCGGCTGCTACCCCTGTGAAAACTCTTGGTTCTAAACGTGCAAGCGAGAGCGAGACTGATAAGAAGGACTCCAAGAAGAAGAAGGTCTCCAACGGTGGAGACGAAGAAGACGGGAAAAAGGTTTCTTTTCAGCGTGTCTGGAGTGAGGAGGACGAAATTGAAATTTTGAAAGCTATGATTGACTATCGAACAAAGAAAGGGTCCGATCCTTATGCTGATATGGGTGCCTTTTACGAATTTGTCAATAAAAGAGTTCATGCGAATGTGTCTAAGAATCAGGTAATTGATAAGATTAGAAGGTTGAAGAAGAAATATCAGACCTATGCTGATAAAAGTGTGGATGGGAAAGACCCGGTTTTAGCTAAGTCTCATGAGCAACAGGCTTATGTACTTTCTAAGAAGATATGGGGTTCTGATAGTGTGGAAAATGGTGAGAAGAATAAGAAAAAGAGTGGGACCATCACCAGAGCTAAGAACAATGGTGCTACTCCTGTTAAAAGGAAGGAAGTTGATACTAAAGATGGGGATCGAGCTGAAGCTAACGCTGAGACTAATGCTGTAGGAAAAGAGAGTTTCTTTCAGAGTTCAGCACTTTTGTCAGTATTGGAAGCAGAGGATATTACCTCAGACCCGGAGGCGACATCATGTCTTCTTCGAGCAGCACTGCCTTTGATTGATTCTGCCAAGGCTAAGGAGTTTGATCAGAAATGGAAAGAATTGCAAAGGGAGCAAATCCATTTTTTTATAAAGAAAACAAGCTTGGTACTTGAGGGTGCGAAATTAGTGCTGGAGGCCGTGAATTCTGACAAGTCTTTGATGGTGACAGGAAAGCAAAGGAGTACAAAATTCTGA 1275 0.4267 MAPKKPLSTRPPPPSSSSSEEESDTEDEQELPQTQTQKSGTPKGKEKKSDTEEDDEENGEDDEEEEEEDVDEKKKPAVKVPVSKSNQPNSHESDSESGTESGNSQLSPSPSDFEIAPISSKPMDDSTKYKKDSMKRNVNISPAATPVKTLGSKRASESETDKKDSKKKKVSNGGDEEDGKKVSFQRVWSEEDEIEILKAMIDYRTKKGSDPYADMGAFYEFVNKRVHANVSKNQVIDKIRRLKKKYQTYADKSVDGKDPVLAKSHEQQAYVLSKKIWGSDSVENGEKNKKKSGTITRAKNNGATPVKRKEVDTKDGDRAEANAETNAVGKESFFQSSALLSVLEAEDITSDPEATSCLLRAALPLIDSAKAKEFDQKWKELQREQIHFFIKKTSLVLEGAKLVLEAVNSDKSLMVTGKQRSTKF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00530 424 MobiDBLite consensus disorder prediction 282 324 - -
Pte17g00530 424 PANTHER BNAANNG10740D PROTEIN-RELATED 41 406 IPR007592 GO:0006355
Pte17g00530 424 Coils Coil 232 252 - -
Pte17g00530 424 MobiDBLite consensus disorder prediction 82 114 - -
Pte17g00530 424 MobiDBLite consensus disorder prediction 1 183 - -
Pte17g00530 424 Pfam Protein of unknown function, DUF573 184 278 IPR007592 GO:0006355
Pte17g00530 424 MobiDBLite consensus disorder prediction 303 321 - -
Pte17g00530 424 MobiDBLite consensus disorder prediction 154 183 - -
Pte17g00530 424 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00530 Pte-Chr17 7420631 7423323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00530 113 409 GeBP Transcription Factor Family AT4G25210 32.166 5.96e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte17g00530 DUF573 1.5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00530 - - qsa:O6P43_000617 283.108