Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00529 ATGAAAAGTGAACTGAGGGGAAGTACGGCTTCCATCTCAGTCCAAAGCCCTAGTCTCTTCAACACAAACCGTAACCCTCTTTCAGGCGCTCTAAACGGGTGTCTGGGAAGTCTTGATGGGGCATGTATCGAAAAGCTTTTACTCCACTGTGCCAGTGCTTTAGAAAACAACGATGTGACTTTGGCTCAACAAGTTATGTGGGTGCTCAATAACGTTGCTTCCTCGGTTGGTGACACTAACCAAAGGCTCACTTCATGGTTTTTGAGGGCACTCATCTCTAGGGCTTCAAGGGTTTGTCCGACGACTATGAGTTTCAATGGAAGCAGCATCCAAAGGAGGTTGATGTCGGTGACTGAGTTAGCAGGGTACGTTGATTTAATCCCGTGGCATCGTTTTGGTTTTAGTGCATCAAATAATGCCATTTTTAAAGCAATTGAAGGATTTCATAGAGTTCATATCTTAGATTTTAGTATTACTCATTGTATGCAATGGCCTACTCTTATTGATGCATTGGCTAAAAGAGAAGAAGGGCCTCCTTCACTCAGAATAACTGTGCCCTCTTGTAGGCCACCAGTCCCTCCCTTGGTTAATGTATCTAGTAAAGAAGTCGGACTCCGTTTGAGAAATTTTGCCAAGTTTAAAGAAGTCCCTTTCGAATTCAACGTGATAGGAAATACTCCCTCATCACCTTCTTCTCATTTGGTCAAAGAGTTTGACTTCGAGTCTCTATTATCTCACTTGAACCCTTCAGTTCTAAACCTTAGGGACGATGAAGCGTTAGTTATAAATTGCCAAAGTTGGTTACGTTATCTCTCCGACGATCAGCGAAACATTAATTGTGGTCAAGACACTTCAATCCGAGACACTTTTCTTAGCATAATTAGAAGTCTGAACCCTCGAATAGTGCTGATAGTGGATGAAGATTGTGACCTTAGTGCGTCCAGTTTAACATCAAGGATCACCACATGTTTCAACTATCTGTGGATTCCGTTTGATGCCCTGGAAACTTTCTTGCCTAAAGATAGCTGCCAGAGATTGGAATATGAATCTGACATTGGACACAAAATCGAAAGCATAATTGGCTTTGAAGGACTGCAGAGGATAGAAAGATTAGAGTCTGGACTAAAATTATCACTGAGAATGAAACATGCTGGGTTCCTTAGCCTTCCATTTTGCGATGAGACTGTAGGAGAAGTGAAGGCTTTGCTTGATGAACATGCTAGTGGTTGGGGTATGAAGAGAGAAGAGGAGACATTAGTACTCACATGGAAGGGCCACAACTCGGTGTTCGTAACAGCTTGGGTCCCCGATGGCATGGAAGATTAA 1326 0.4284 MKSELRGSTASISVQSPSLFNTNRNPLSGALNGCLGSLDGACIEKLLLHCASALENNDVTLAQQVMWVLNNVASSVGDTNQRLTSWFLRALISRASRVCPTTMSFNGSSIQRRLMSVTELAGYVDLIPWHRFGFSASNNAIFKAIEGFHRVHILDFSITHCMQWPTLIDALAKREEGPPSLRITVPSCRPPVPPLVNVSSKEVGLRLRNFAKFKEVPFEFNVIGNTPSSPSSHLVKEFDFESLLSHLNPSVLNLRDDEALVINCQSWLRYLSDDQRNINCGQDTSIRDTFLSIIRSLNPRIVLIVDEDCDLSASSLTSRITTCFNYLWIPFDALETFLPKDSCQRLEYESDIGHKIESIIGFEGLQRIERLESGLKLSLRMKHAGFLSLPFCDETVGEVKALLDEHASGWGMKREEETLVLTWKGHNSVFVTAWVPDGMED* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00529 441 ProSiteProfiles GRAS family profile. 34 435 IPR005202 -
Pte17g00529 441 Pfam GRAS domain family 44 434 IPR005202 -
Pte17g00529 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 430 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00529 Pte-Chr17 7391083 7392748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00529 19 436 GRAS Transcription Factor Family AT3G49950 45.991 6.02e-125 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte17g00529 GRAS 3.3e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00529 - - qsa:O6P43_000622 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00529 17 7391083 7392748 Pte17g00529 17 7391083 7392748 RCT