Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00522 ATGAAGAACTGCGAGCTTTGTAAGAAAAGAGCGACGGCGTTCTGTGAATCGGACCAGGCTAGTTTGTGCTGGAACTGTGACGCAAAGGTTCATGGTGCAAACTTTCTGGTAGCTAGGCATTCCAGGACTCTTCTGTGCCATTCTTGTCAGTGTCCTACGCCGTGGAAAGCCTCCGGTGCAAAGCTAGGAAACACTTTTTCTATATGTGAGACTTGTAAGGCTAGCTTGAGAGGAGAAGAAAGCGAGACTGGCAATGAAGATGATGTTGGAACAGATGATGACGTCAATGACGATGGAGACAGTGGGGACTTCGATGTGCACCGTAACGATGTTATATCAGATAATGACGATGAGGTCGATGGTGATGACGAAGATGGCGATAATCAGGTCGTACCTTTTTCAACTTCTTCGTCGCCACCTCCGGCGCCCGCGAGCTCGTCAAGCAGCGATGAATCTGTCTACAAGTTCAGTAACAATGACGGAGATTTCTCTGAATCAGTCTCGGTTTTTTCCTTGAAGAGAATGCGTGAAGATGCACCAGATCTCCCCCTTCAGAAAGACGATCTGAGGTGCTCATCGAGGTATGGTTCAAAGTTTATCAACGATGAGGTTGTTGAGTCGCGGACGGGTGGTGAAGCCACGTGCCATGAGTCATGGAGGCCGTTCAAAGACAGGAGAATTGGACCGGGTCGGACCAGTTTGTAA 705 0.4879 MKNCELCKKRATAFCESDQASLCWNCDAKVHGANFLVARHSRTLLCHSCQCPTPWKASGAKLGNTFSICETCKASLRGEESETGNEDDVGTDDDVNDDGDSGDFDVHRNDVISDNDDEVDGDDEDGDNQVVPFSTSSSPPPAPASSSSSDESVYKFSNNDGDFSESVSVFSLKRMREDAPDLPLQKDDLRCSSRYGSKFINDEVVESRTGGEATCHESWRPFKDRRIGPGRTSL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00522 234 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 185 - -
Pte17g00522 234 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pte17g00522 234 MobiDBLite consensus disorder prediction 85 100 - -
Pte17g00522 234 CDD Bbox1_BBX-like 4 45 - -
Pte17g00522 234 MobiDBLite consensus disorder prediction 129 158 - -
Pte17g00522 234 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Pte17g00522 234 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Pte17g00522 234 MobiDBLite consensus disorder prediction 80 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00522 Pte-Chr17 7266838 7269349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00522 2 74 C2C2-CO-like Transcription Factor Family AT4G27310 67.123 1.35e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte17g00522 zf-B_box 7.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00522 - - qsa:O6P43_028736 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00522 17 7266838 7269349 Pte17g00522 17 7266838 7269349 RCT